WormBase Tree Display for Gene: WBGene00016636
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| WBGene00016636 | SMap | S_parent | Sequence | C44B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | perm-2 | Person_evidence | WBPerson2357 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | C44B12.1 | ||||||||
| Molecular_name | C44B12.1 | ||||||||
| C44B12.1.1 | |||||||||
| CE27850 | |||||||||
| Other_name | CELE_C44B12.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | perm-2 | ||||||||
| DB_info | Database | AceView | gene | 4B881 | |||||
| WormQTL | gene | WBGene00016636 | |||||||
| WormFlux | gene | WBGene00016636 | |||||||
| NDB | locus_tag | CELE_C44B12.1 | |||||||
| NCBI | gene | 176933 | |||||||
| RefSeq | protein | NM_067641.8 | |||||||
| TrEMBL | UniProtAcc | O44145 | |||||||
| UniProt_GCRP | UniProtAcc | O44145 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Aug 2011 13:38:18 | WBPerson2970 | Name_change | CGC_name | perm-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | perm | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00051202 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Structured_description | Concise_description | PERM-2 is a secreted protein that localizes to the surface of unfertilized oocytes and the embryonic eggshell; genetic and co-IP studies show that PERM-2 interacts with PERM-4 and CBD-1 to form a protein complex required for structural integrity of the vitelline layer of the eggshell. | Paper_evidence | WBPaper00055058 | |||||
| Person_evidence | WBPerson2357 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 10 Oct 2018 00:00:00 | ||||||||
| Automated_description | Expressed in oocyte. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C44B12.1 | |||||||
| Corresponding_transcript | C44B12.1.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf995352 | ||||||||
| WBsf995353 | |||||||||
| WBsf995354 | |||||||||
| WBsf995355 | |||||||||
| WBsf1016666 | |||||||||
| WBsf227917 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029782 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085586 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042416 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008518 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13858 | ||||||||
| Expr1014857 | |||||||||
| Expr1146404 | |||||||||
| Expr2014827 | |||||||||
| Expr2033061 | |||||||||
| Drives_construct | WBCnstr00040213 | ||||||||
| Construct_product | WBCnstr00040213 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (260) | |||||||||
| Interaction (242) | |||||||||
| Map_info | Map | IV | Position | -21.6273 | Error | 0.049995 | |||
| Positive | Positive_clone | C44B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00052142 | ||||||||
| WBPaper00055058 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
