WormBase Tree Display for Gene: WBGene00016623
expand all nodes | collapse all nodes | view schema
| WBGene00016623 | SMap | S_parent | Sequence | B0252 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | psmd-9 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C44B7.1 | ||||||||
| Molecular_name | C44B7.1 | ||||||||
| C44B7.1.1 | |||||||||
| CE25810 | |||||||||
| Other_name | CELE_C44B7.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | psmd-9 | ||||||||
| DB_info | Database | AceView | gene | 2H191C | |||||
| 2H191 | |||||||||
| WormQTL | gene | WBGene00016623 | |||||||
| NDB | locus_tag | CELE_C44B7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016623|UniProtKB=Q10920 | |||||||
| family | PTHR12651 | ||||||||
| NCBI | gene | 24104302 | |||||||
| RefSeq | protein | NM_001393109.1 | |||||||
| SwissProt | UniProtAcc | Q10920 | |||||||
| TREEFAM | TREEFAM_ID | TF105995 | |||||||
| UniProt_GCRP | UniProtAcc | Q10920 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 07 Feb 2012 16:30:56 | WBPerson2970 | Name_change | CGC_name | psmd-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | psmd | ||||||||
| Allele (11) | |||||||||
| Strain | WBStrain00051250 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00056835 | ||||||||
| 00056836 | |||||||||
| 00056837 | |||||||||
| 00056838 | |||||||||
| 00056839 | |||||||||
| 00122199 | |||||||||
| Contained_in_operon | CEOP2264 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in proteasome regulatory particle assembly. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human PSMD9 (proteasome 26S subunit, non-ATPase 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C44B7.1 | |||||||
| Corresponding_transcript | C44B7.1.1 | ||||||||
| Other_sequence (30) | |||||||||
| Associated_feature | WBsf221521 | ||||||||
| WBsf221522 | |||||||||
| WBsf221523 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011909 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076213 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061751 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042423 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012927 | ||||||||
| Expr1037144 | |||||||||
| Expr1146412 | |||||||||
| Expr2015135 | |||||||||
| Expr2033373 | |||||||||
| Drives_construct | WBCnstr00027930 | ||||||||
| Construct_product | WBCnstr00027930 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction (63) | |||||||||
| Map_info | Map | II | Position | 0.137832 | |||||
| Positive | Positive_clone | C44B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048675 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
