WormBase Tree Display for Gene: WBGene00016614
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WBGene00016614 | SMap | S_parent | Sequence | C43H6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 5 | |||||
Name | CGC_name | trpp-12 | Person_evidence | WBPerson3188 | |||
Sequence_name | C43H6.1 | ||||||
Molecular_name | C43H6.1 | ||||||
C43H6.1.1 | |||||||
CE37619 | |||||||
Other_name | CELE_C43H6.1 | Accession_evidence | NDB | BX284606 | |||
Public_name | trpp-12 | ||||||
DB_info | Database | AceView | gene | XD31 | |||
WormQTL | gene | WBGene00016614 | |||||
WormFlux | gene | WBGene00016614 | |||||
NDB | locus_tag | CELE_C43H6.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016614|UniProtKB=Q5WRR4 | |||||
family | PTHR21581 | ||||||
NCBI | gene | 180546 | |||||
RefSeq | protein | NM_076038.5 | |||||
TREEFAM | TREEFAM_ID | TF320881 | |||||
TrEMBL | UniProtAcc | Q5WRR4 | |||||
UniProt_GCRP | UniProtAcc | Q5WRR4 | |||||
Species | Caenorhabditis elegans | ||||||
History (3) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | trpp | ||||||
Allele (59) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00081467 | ||||||
00081468 | |||||||
Contained_in_operon | CEOPX028 | ||||||
Ortholog (29) | |||||||
Structured_description | Automated_description | Predicted to be located in Golgi apparatus. Predicted to be part of TRAPP complex. Is an ortholog of human TRAPPC12 (trafficking protein particle complex subunit 12). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C43H6.1 | |||||
Corresponding_CDS_history | C43H6.1:wp133 | ||||||
C43H6.1a:wp264 | |||||||
C43H6.1b:wp264 | |||||||
Corresponding_transcript | C43H6.1.1 | ||||||
Other_sequence | CRC05689_1 | ||||||
CJC04198_1 | |||||||
NB06680 | |||||||
Associated_feature | WBsf647858 | ||||||
Experimental_info | RNAi_result | WBRNAi00011895 | Inferred_automatically | RNAi_primary | |||
WBRNAi00011894 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029772 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011901 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00023086 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042400 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042399 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025144 | ||||||
Expr1037137 | |||||||
Expr1146391 | |||||||
Expr2017508 | |||||||
Expr2035647 | |||||||
Drives_construct | WBCnstr00027936 | ||||||
Construct_product | WBCnstr00027936 | ||||||
Microarray_results (30) | |||||||
Expression_cluster (151) | |||||||
Interaction | WBInteraction000251396 | ||||||
WBInteraction000431223 | |||||||
Map_info | Map | X | Position | -15.5671 | |||
Positive | Positive_clone | C43H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
[140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag. | |||||||
Method | Gene |