WormBase Tree Display for Gene: WBGene00016602
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WBGene00016602 | SMap | S_parent | Sequence | C43E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mus-81 | Paper_evidence | WBPaper00028727 | |||||
Sequence_name | C43E11.2 | ||||||||
Molecular_name | C43E11.2a | ||||||||
C43E11.2a.1 | |||||||||
CE08680 | |||||||||
C43E11.2b | |||||||||
CE32609 | |||||||||
C43E11.2b.1 | |||||||||
C43E11.2b.2 | |||||||||
C43E11.2b.3 | |||||||||
Other_name | CELE_C43E11.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | mus-81 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 11 Dec 2006 12:29:53 | WBPerson1847 | Name_change | CGC_name | mus-81 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mus | ||||||||
Allele (42) | |||||||||
Strain | WBStrain00034679 | ||||||||
WBStrain00034681 | |||||||||
WBStrain00034682 | |||||||||
WBStrain00034697 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (42) | |||||||||
Contained_in_operon | CEOP1168 | ||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00018923 | Caenorhabditis elegans | From_analysis | Panther | |||||
Structured_description | Automated_description | Enables enzyme binding activity. Involved in several processes, including DNA recombination; larval development; and positive regulation of embryonic development. Predicted to be located in nucleus. Predicted to be part of Holliday junction resolvase complex. Is an ortholog of human MUS81 (MUS81 structure-specific endonuclease subunit). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C43E11.2a | |||||||
C43E11.2b | |||||||||
Corresponding_transcript | C43E11.2a.1 | ||||||||
C43E11.2b.1 | |||||||||
C43E11.2b.2 | |||||||||
C43E11.2b.3 | |||||||||
Other_sequence (13) | |||||||||
Associated_feature | WBsf217513 | ||||||||
WBsf217514 | |||||||||
Experimental_info | RNAi_result | WBRNAi00042381 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003140 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00117051 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029759 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016841 | ||||||||
Expr1037128 | |||||||||
Expr1146370 | |||||||||
Expr2013828 | |||||||||
Expr2032068 | |||||||||
Drives_construct | WBCnstr00027946 | ||||||||
Construct_product | WBCnstr00027946 | ||||||||
Microarray_results | SMD_C43E11.2 | ||||||||
SMD_C43E11.9 | |||||||||
184653_at | |||||||||
A_12_P102927 | |||||||||
Aff_C43E11.2 | |||||||||
GPL13394_WBGene00016602 | |||||||||
GPL13914_C43E11.2 | |||||||||
GPL14144_C43E11.2a_1201-1260_0.876_47_C | |||||||||
GPL14144_C43E11.2a_819-878_0.938_4_B | |||||||||
GPL14144_C43E11.2a_861-920_0.916_19_A | |||||||||
GPL19516_CGZ0008664 | |||||||||
GPL19516_CGZ0008665 | |||||||||
GPL21109_C43E11.2a | |||||||||
GPL3518_CE32609 | |||||||||
GPL8304_CE_WBGene00016602_A | |||||||||
GPL8304_CE_WBGene00016602_B | |||||||||
GPL8673_C43E11_2aP00107 | |||||||||
GPL8673_C43E11_2aP00421 | |||||||||
GPL8673_C43E11_2aP00592 | |||||||||
GPL8673_C43E11_2bP00018 | |||||||||
GPL8673_C43E11_2bP00195 | |||||||||
GPL8673_C43E11_2bP00340 | |||||||||
GPL9450_C43E11.2a | |||||||||
GPL9450_C43E11.2b | |||||||||
cea2.d.01327 | |||||||||
cea2.d.01330 | |||||||||
Expression_cluster (108) | |||||||||
SAGE_tag | SAGE:gttcgagggc | Strand | Antisense | ||||||
SAGE:ggtctcgttaggaattt | Strand | Antisense | |||||||
SAGE:gctaatcgaa | Strand | Antisense | |||||||
SAGE:ggtctcgtta | Strand | Antisense | |||||||
SAGE:gatggaaatcgatcggc | Strand | Antisense | |||||||
SAGE:aataaaaaaa | Strand | Antisense | |||||||
SAGE:gtatccctgc | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gtatccctgctttcata | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (37) | |||||||||
Map_info | Map | I | Position | -1.52341 | Error | 0.003125 | |||
Positive | Positive_clone | C43E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (25) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |