WormBase Tree Display for Gene: WBGene00016590
expand all nodes | collapse all nodes | view schema
| WBGene00016590 | SMap | S_parent | Sequence | C42C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C42C1.12 | |||||||
| Molecular_name | C42C1.12 | ||||||||
| C42C1.12.1 | |||||||||
| CE16918 | |||||||||
| Other_name | CELE_C42C1.12 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C42C1.12 | ||||||||
| DB_info | Database | AceView | gene | 4N46 | |||||
| WormQTL | gene | WBGene00016590 | |||||||
| WormFlux | gene | WBGene00016590 | |||||||
| NDB | locus_tag | CELE_C42C1.12 | |||||||
| NCBI | gene | 178177 | |||||||
| RefSeq | protein | NM_069935.7 | |||||||
| TrEMBL | UniProtAcc | A3QMC3 | |||||||
| UniProt_GCRP | UniProtAcc | A3QMC3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| Strain | WBStrain00036370 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpaaaap; AFD; I5 neuron; cholinergic neurons; and germ line based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; let-60; and sir-2.1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; metformin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C42C1.12 | |||||||
| Corresponding_transcript | C42C1.12.1 | ||||||||
| Other_sequence (15) | |||||||||
| Associated_feature | WBsf230995 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042333 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011860 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028015 | ||||||||
| Expr1037120 | |||||||||
| Expr1146325 | |||||||||
| Expr2001580 | |||||||||
| Expr2019804 | |||||||||
| Drives_construct | WBCnstr00027957 | ||||||||
| Construct_product | WBCnstr00027957 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction | WBInteraction000274656 | ||||||||
| Map_info | Positive | Positive_clone | C42C1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 5.83332 | |||||||
| Method | Gene |
