WormBase Tree Display for Gene: WBGene00016589
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| WBGene00016589 | SMap | S_parent | Sequence | C42C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ltah-1.1 | |||||||
| Sequence_name | C42C1.11 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | AP-1 | Paper_evidence | WBPaper00003241 | ||||||
| Accession_evidence | EMBL | AF068200 | |||||||
| AF068201 | |||||||||
| cm01c7 | Paper_evidence | WBPaper00003241 | |||||||
| CELE_C42C1.11 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | ltah-1.1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 May 2017 14:23:55 | WBPerson2970 | Name_change | CGC_name | ltah-1.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ltah | ||||||||
| Allele (26) | |||||||||
| Strain | WBStrain00036370 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Contained_in_operon | CEOP4504 | ||||||||
| Ortholog (33) | |||||||||
| Paralog (12) | |||||||||
| Structured_description | Automated_description | Enables aminopeptidase activity. Involved in peptide catabolic process. Located in cytosol. Is an ortholog of human LTA4H (leukotriene A4 hydrolase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C42C1.11a | |||||||
| C42C1.11b | |||||||||
| C42C1.11c | |||||||||
| Corresponding_transcript | C42C1.11a.1 | ||||||||
| C42C1.11a.2 | |||||||||
| C42C1.11b.1 | |||||||||
| C42C1.11b.2 | |||||||||
| C42C1.11c.1 | |||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf229267 | ||||||||
| WBsf229268 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000749 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042332 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011859 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042333 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011860 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042331 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026840 | ||||||||
| Expr1037119 | |||||||||
| Expr1146324 | |||||||||
| Expr2001579 | |||||||||
| Expr2019803 | |||||||||
| Drives_construct | WBCnstr00027958 | ||||||||
| Construct_product | WBCnstr00027958 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (80) | |||||||||
| Interaction (49) | |||||||||
| Map_info | Map | IV | Position | 5.83286 | |||||
| Positive | Positive_clone | C42C1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00003241 | ||||||||
| WBPaper00028527 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00048904 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00062255 | |||||||||
| WBPaper00062426 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
