WormBase Tree Display for Gene: WBGene00016549

WBGene00016549 SMap: S_parent: Sequence: C40A11
  Identity: Version: 1
    Name: Sequence_name: C40A11.6
      Molecular_name: C40A11.6
        C40A11.6.1
        CE27840
      Other_name: CELE_C40A11.6 Accession_evidence: NDB BX284602
      Public_name: C40A11.6
    DB_info: Database: AceView gene 2C434
        WormQTL gene WBGene00016549
        WormFlux gene WBGene00016549
        NDB locus_tag CELE_C40A11.6
        Panther gene CAEEL|WormBase=WBGene00016549|UniProtKB=Q9TZA8
          family PTHR11145
        NCBI gene 173572
        RefSeq protein NM_061796.4
        TREEFAM TREEFAM_ID TF315649
        TrEMBL UniProtAcc Q9TZA8
        UniProt_GCRP UniProtAcc Q9TZA8
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (82)
    RNASeq_FPKM (74)
    GO_annotation: 00122140
    Ortholog: WBGene00060792 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00036112 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00038825 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
      WBGene00145322 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
      WBGene00060793 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00064689 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00118399 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00161644 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00023523 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00223310 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g19907 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      Cnig_chr_III.g11420 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold581.g4592 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02408.g26345 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_007409 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_007492 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrII_pilon.g3596 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00060761 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00244387 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00281604 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00292950 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296693 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297399 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0033017 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-030131-5610 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040426-2843 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-060825-162 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      HGNC:11894 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      MGI:1923739 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      MGI:2141207 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      RGD:3877 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1591979 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            PhylomeDB
    Paralog (31)
    Structured_description: Automated_description: Predicted to be involved in protein homooligomerization. Is an ortholog of human TNFAIP1 (TNF alpha induced protein 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C40A11.6
    Corresponding_transcript: C40A11.6.1
    Associated_feature: WBsf649915
      WBsf655336
      WBsf655351
      WBsf986886
      WBsf1011677
      WBsf222747
  Experimental_info: RNAi_result: WBRNAi00011807 Inferred_automatically: RNAi_primary
      WBRNAi00042244 Inferred_automatically: RNAi_primary
      WBRNAi00011808 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023465
      Expr1037095
      Expr1146236
      Expr2001550
      Expr2019771
    Drives_construct: WBCnstr00027983
    Construct_product: WBCnstr00027983
    Microarray_results (20)
    Expression_cluster (158)
    Interaction (168)
  Map_info: Positive: Positive_clone: C40A11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -13.8437
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene