WormBase Tree Display for Gene: WBGene00016521
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| WBGene00016521 | SMap | S_parent | Sequence | C39B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-62 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C39B5.3 | ||||||||
| Molecular_name | C39B5.3 | ||||||||
| C39B5.3.1 | |||||||||
| CE39334 | |||||||||
| Other_name | CELE_C39B5.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-62 | ||||||||
| DB_info | Database | AceView | gene | 3D317 | |||||
| WormQTL | gene | WBGene00016521 | |||||||
| WormFlux | gene | WBGene00016521 | |||||||
| NDB | locus_tag | CELE_C39B5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016521|UniProtKB=Q9N5W9 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 183322 | |||||||
| RefSeq | protein | NM_065115.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q9N5W9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5W9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-62 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Enriched in excretory gland cell based on single-cell RNA-seq studies. Is affected by several genes including daf-16; glp-1; and daf-12 based on microarray and RNA-seq studies. Is affected by six chemicals including Sodium Chloride; Psoralens; and allantoin based on RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39B5.3 | |||||||
| Corresponding_CDS_history | C39B5.3:wp151 | ||||||||
| Corresponding_transcript | C39B5.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042190 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029674 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028277 | ||||||||
| Expr1146186 | |||||||||
| Expr2011563 | |||||||||
| Expr2029801 | |||||||||
| Drives_construct | WBCnstr00028002 | ||||||||
| Construct_product | WBCnstr00028002 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (75) | |||||||||
| Map_info | Map | III | Position | -14.8983 | Error | 0.008824 | |||
| Positive | Positive_clone | C39B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
