WormBase Tree Display for Gene: WBGene00016518
expand all nodes | collapse all nodes | view schema
| WBGene00016518 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C38C5.1 | |||||||
| Molecular_name | C38C5.1a | ||||||||
| C38C5.1a.1 | |||||||||
| CE53326 | |||||||||
| C38C5.1b | |||||||||
| CE53224 | |||||||||
| C38C5.1b.1 | |||||||||
| Other_name | CELE_C38C5.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C38C5.1 | ||||||||
| DB_info | Database | AceView | gene | XG181 | |||||
| WormQTL | gene | WBGene00016518 | |||||||
| WormFlux | gene | WBGene00016518 | |||||||
| NDB | locus_tag | CELE_C38C5.1 | |||||||
| NCBI | gene | 183305 | |||||||
| RefSeq | protein | NM_001270096.2 | |||||||
| NM_001373306.1 | |||||||||
| TrEMBL | UniProtAcc | H2KZ91 | |||||||
| C6KRG2 | |||||||||
| UniProt_GCRP | UniProtAcc | C6KRG2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (63) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including pgl-1; glh-1; and pgl-3 based on microarray and RNA-seq studies. Is affected by seven chemicals including Tunicamycin; metformin; and Sirolimus based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C38C5.1a | |||||||
| C38C5.1b | |||||||||
| Corresponding_CDS_history | C38C5.1:wp107 | ||||||||
| C38C5.1a:wp271 | |||||||||
| C38C5.1b:wp271 | |||||||||
| Corresponding_transcript | C38C5.1a.1 | ||||||||
| C38C5.1b.1 | |||||||||
| Other_sequence | MAC02085_1 | ||||||||
| MA01114 | |||||||||
| FK804085.1 | |||||||||
| Associated_feature | WBsf1005301 | ||||||||
| WBsf1005302 | |||||||||
| WBsf1005303 | |||||||||
| WBsf1005304 | |||||||||
| WBsf1005305 | |||||||||
| WBsf1005306 | |||||||||
| WBsf1005307 | |||||||||
| WBsf1022968 | |||||||||
| WBsf1022969 | |||||||||
| WBsf1022970 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011748 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042146 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029657 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014820 | ||||||||
| Expr1037082 | |||||||||
| Expr1146148 | |||||||||
| Expr2001511 | |||||||||
| Expr2019733 | |||||||||
| Drives_construct | WBCnstr00028005 | ||||||||
| Construct_product | WBCnstr00028005 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (55) | |||||||||
| Interaction | WBInteraction000168546 | ||||||||
| WBInteraction000334110 | |||||||||
| Map_info | Positive | Positive_clone | C38C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -4.79432 | |||||||
| Method | Gene |
