WormBase Tree Display for Gene: WBGene00016488
expand all nodes | collapse all nodes | view schema
| WBGene00016488 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C36C9.5 | |||||||
| Molecular_name | C36C9.5 | ||||||||
| C36C9.5.1 | |||||||||
| CE53234 | |||||||||
| Other_name | CELE_C36C9.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C36C9.5 | ||||||||
| DB_info | Database | AceView | gene | XC316 | |||||
| WormQTL | gene | WBGene00016488 | |||||||
| WormFlux | gene | WBGene00016488 | |||||||
| NDB | locus_tag | CELE_C36C9.5 | |||||||
| NCBI | gene | 183275 | |||||||
| RefSeq | protein | NM_001373232.2 | |||||||
| TREEFAM | TREEFAM_ID | TF351201 | |||||||
| TrEMBL | UniProtAcc | Q9TZK6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZK6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (105) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00029744 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00029747 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00150652 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g21953 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_15760 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| GCK72_007035 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18491 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00066893 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| WBGene00073127 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00020777 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; sir-2.1; and clk-1 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36C9.5 | |||||||
| Corresponding_CDS_history | C36C9.5:wp271 | ||||||||
| Corresponding_transcript | C36C9.5.1 | ||||||||
| Other_sequence | SRC04755_1 | ||||||||
| JI482536.1 | |||||||||
| JI472618.1 | |||||||||
| JI473278.1 | |||||||||
| JI480030.1 | |||||||||
| Associated_feature | WBsf653710 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00012847 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011702 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042069 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017521 | ||||||||
| Expr1146067 | |||||||||
| Expr2001478 | |||||||||
| Expr2019700 | |||||||||
| Drives_construct | WBCnstr00028026 | ||||||||
| Construct_product | WBCnstr00028026 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (70) | |||||||||
| Interaction | WBInteraction000263329 | ||||||||
| WBInteraction000289045 | |||||||||
| WBInteraction000403845 | |||||||||
| WBInteraction000414945 | |||||||||
| Map_info | Positive | Positive_clone | C36C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -17.7269 | |||||||
| Method | Gene |
