WormBase Tree Display for Gene: WBGene00016485
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WBGene00016485 | SMap | S_parent | Sequence | C36C9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | meg-4 | Person_evidence | WBPerson261 | |||
WBPerson9884 | |||||||
WBPerson575 | |||||||
Sequence_name | C36C9.1 | ||||||
Molecular_name | C36C9.1 | ||||||
C36C9.1.1 | |||||||
CE19720 | |||||||
Other_name | CELE_C36C9.1 | Accession_evidence | NDB | BX284606 | |||
Public_name | meg-4 | ||||||
DB_info | Database | AceView | gene | XC305 | |||
WormQTL | gene | WBGene00016485 | |||||
WormFlux | gene | WBGene00016485 | |||||
NDB | locus_tag | CELE_C36C9.1 | |||||
NCBI | gene | 180497 | |||||
RefSeq | protein | NM_075909.4 | |||||
TREEFAM | TREEFAM_ID | TF322203 | |||||
TrEMBL | UniProtAcc | Q9TZK8 | |||||
UniProt_GCRP | UniProtAcc | Q9TZK8 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | meg | ||||||
Allele (63) | |||||||
Strain (13) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Ortholog | chrX_pilon.g18488 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Paralog | WBGene00018688 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00001569 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00219451 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Involved in P granule assembly; germ cell proliferation; and organelle localization. Located in P granule. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C36C9.1 | |||||
Corresponding_transcript | C36C9.1.1 | ||||||
Associated_feature | WBsf647832 | ||||||
WBsf1004128 | |||||||
WBsf1004129 | |||||||
WBsf1022334 | |||||||
WBsf1022335 | |||||||
WBsf235349 | |||||||
Experimental_info | RNAi_result | WBRNAi00011698 | Inferred_automatically | RNAi_primary | |||
WBRNAi00029612 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042065 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082906 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007943 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr155 | ||||||
Expr12115 | |||||||
Expr1025441 | |||||||
Expr1037066 | |||||||
Expr1146063 | |||||||
Expr2013511 | |||||||
Expr2031745 | |||||||
Drives_construct | WBCnstr00028029 | ||||||
Construct_product | WBCnstr00028029 | ||||||
Regulate_expr_cluster | WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated | ||||||
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_upregulated | |||||||
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets | |||||||
WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_upregulated_endo-siRNA_targets | |||||||
WBPaper00057162:meg-3_meg-4_downregulated_sRNA | |||||||
WBPaper00057162:meg-3_meg-4_upregulated_sRNA | |||||||
Microarray_results (19) | |||||||
Expression_cluster (182) | |||||||
Interaction (50) | |||||||
Map_info | Map | X | Position | -17.7713 | |||
Positive | Positive_clone | C36C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (14) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |