WormBase Tree Display for Gene: WBGene00016472
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| WBGene00016472 | SMap | S_parent | Sequence | C36C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srbc-6 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C36C5.3 | ||||||||
| Molecular_name | C36C5.3 | ||||||||
| C36C5.3.1 | |||||||||
| CE38041 | |||||||||
| Other_name | CELE_C36C5.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srbc-6 | ||||||||
| DB_info | Database | AceView | gene | 5D641 | |||||
| WormQTL | gene | WBGene00016472 | |||||||
| WormFlux | gene | WBGene00016472 | |||||||
| NDB | locus_tag | CELE_C36C5.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016472|UniProtKB=O16411 | |||||||
| family | PTHR10664 | ||||||||
| NCBI | gene | 183259 | |||||||
| RefSeq | protein | NM_071473.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315371 | |||||||
| TrEMBL | UniProtAcc | O16411 | |||||||
| UniProt_GCRP | UniProtAcc | O16411 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Feb 2005 11:21:21 | WBPerson2970 | Name_change | CGC_name | srbc-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srbc | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028006 | ||||||||
| Ortholog (24) | |||||||||
| Paralog (123) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C36C5.3 | |||||||
| Corresponding_CDS_history | C36C5.3:wp138 | ||||||||
| Corresponding_transcript | C36C5.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00042058 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011692 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015346 | ||||||||
| Expr1146056 | |||||||||
| Expr2016212 | |||||||||
| Drives_construct | WBCnstr00028040 | ||||||||
| Construct_product | WBCnstr00028040 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster | WBPaper00032528:L3_depleted | ||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00045774:clk-1_downregulated | |||||||||
| WBPaper00061527:srj-42-srw-113 | |||||||||
| WBPaper00062103:neuron_enriched | |||||||||
| cgc4489_group_21 | |||||||||
| WBPaper00030985:Serratia_marcesens_upregulated | |||||||||
| WBPaper00036286:Pattern_I | |||||||||
| Interaction | WBInteraction000180794 | ||||||||
| WBInteraction000439862 | |||||||||
| WBInteraction000446349 | |||||||||
| Map_info | Map | V | Position | -12.7276 | Error | 0.000482 | |||
| Positive | Positive_clone | C36C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
