WormBase Tree Display for Gene: WBGene00016450
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WBGene00016450 | SMap | S_parent | Sequence | C35D10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-5 | Person_evidence | WBPerson655 | |||
Sequence_name | C35D10.14 | ||||||
Molecular_name | C35D10.14 | ||||||
C35D10.14.1 | |||||||
CE27828 | |||||||
Other_name | CELE_C35D10.14 | Accession_evidence | NDB | BX284603 | |||
Public_name | clec-5 | ||||||
DB_info | Database | AceView | gene | 3F972 | |||
WormQTL | gene | WBGene00016450 | |||||
WormFlux | gene | WBGene00016450 | |||||
NDB | locus_tag | CELE_C35D10.14 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016450|UniProtKB=Q18492 | |||||
family | PTHR22991 | ||||||
NCBI | gene | 175652 | |||||
RefSeq | protein | NM_065621.9 | |||||
TREEFAM | TREEFAM_ID | TF351663 | |||||
TrEMBL | UniProtAcc | Q18492 | |||||
UniProt_GCRP | UniProtAcc | Q18492 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (26) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (19) | |||||||
Paralog (52) | |||||||
Structured_description | Automated_description | Expressed in head. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C35D10.14 | |||||
Corresponding_transcript | C35D10.14.1 | ||||||
Other_sequence | CSC00576_1 | ||||||
FD515851.1 | |||||||
Associated_feature | WBsf651010 | ||||||
WBsf666831 | |||||||
WBsf226593 | |||||||
Experimental_info | RNAi_result | WBRNAi00005244 | Inferred_automatically | RNAi_primary | |||
WBRNAi00041977 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1698 | ||||||
Chronogram1773 | |||||||
Expr5435 | |||||||
Expr5436 | |||||||
Expr1022018 | |||||||
Expr1145990 | |||||||
Expr2010192 | |||||||
Expr2028435 | |||||||
Drives_construct | WBCnstr00002990 | ||||||
WBCnstr00004489 | |||||||
WBCnstr00028059 | |||||||
Construct_product | WBCnstr00016484 | ||||||
WBCnstr00028059 | |||||||
Microarray_results (15) | |||||||
Expression_cluster (271) | |||||||
Interaction | WBInteraction000324062 | ||||||
WBInteraction000408591 | |||||||
Map_info | Map | III | Position | -2.40989 | Error | 0.000692 | |
Positive | Positive_clone | C35D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031686 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00058665 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |