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WormBase Tree Display for Gene: WBGene00016429

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Name Class

WBGene00016429SMapS_parentSequenceC35A11
IdentityVersion1
NameSequence_nameC35A11.2
Molecular_nameC35A11.2
C35A11.2.1
CE35253
C35A11.2.2
Other_nameCELE_C35A11.2Accession_evidenceNDBBX284605
Public_nameC35A11.2
DB_infoDatabaseAceViewgene5F861
WormQTLgeneWBGene00016429
WormFluxgeneWBGene00016429
NDBlocus_tagCELE_C35A11.2
NCBIgene183227
RefSeqproteinNM_072028.7
TREEFAMTREEFAM_IDTF325385
TrEMBLUniProtAccO16546
UniProt_GCRPUniProtAccO16546
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (54)
RNASeq_FPKM (74)
OrthologWBGene00030990Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00058944Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00157947Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00133289Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g1719Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g8910Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15796Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14208Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18047Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17496Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2054Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21841Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24657Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00907.g14873Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-C35A11.2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16161Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00915.g16718Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01617.g22095Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01617.g22097Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_12052Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017733Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_50193910Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14229Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in arc ant V; hypodermis; pharyngeal cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by seventeen chemicals including stavudine; Zidovudine; and metformin based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC35A11.2
Corresponding_CDS_historyC35A11.2:wp106
Corresponding_transcriptC35A11.2.1
C35A11.2.2
Associated_featureWBsf661253
WBsf661254
WBsf231751
Experimental_infoRNAi_resultWBRNAi00041942Inferred_automaticallyRNAi_primary
WBRNAi00011637Inferred_automaticallyRNAi_primary
WBRNAi00029558Inferred_automaticallyRNAi_primary
Expr_patternExpr1018108
Expr1145949
Expr2001419
Expr2019642
Drives_constructWBCnstr00028075
Construct_productWBCnstr00028075
Microarray_results (18)
Expression_cluster (174)
Interaction (17)
Map_infoPositivePositive_cloneC35A11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV-2.1219
MethodGene