WormBase Tree Display for Gene: WBGene00016425
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WBGene00016425 | SMap | S_parent | Sequence | C34H4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C34H4.2 | |||||||
Molecular_name | C34H4.2 | ||||||||
C34H4.2.1 | |||||||||
CE31328 | |||||||||
Other_name | CELE_C34H4.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | C34H4.2 | ||||||||
DB_info | Database | AceView | gene | 4C317 | |||||
WormQTL | gene | WBGene00016425 | |||||||
WormFlux | gene | WBGene00016425 | |||||||
NDB | locus_tag | CELE_C34H4.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016425|UniProtKB=O45143 | |||||||
family | PTHR21733 | ||||||||
NCBI | gene | 183220 | |||||||
RefSeq | protein | NM_067695.5 | |||||||
TREEFAM | TREEFAM_ID | TF315857 | |||||||
TrEMBL | UniProtAcc | O45143 | |||||||
UniProt_GCRP | UniProtAcc | O45143 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (93) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (32) | |||||||||
Paralog (21) | |||||||||
Structured_description | Automated_description | Enriched in OLL; PVD; head mesodermal cell; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by thirty-five chemicals including Heme; hydrogen sulfide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C34H4.2 | |||||||
Corresponding_transcript | C34H4.2.1 | ||||||||
Other_sequence | CJC17544_1 | ||||||||
CR04404 | |||||||||
CRC10254_1 | |||||||||
Associated_feature | WBsf645797 | ||||||||
WBsf995485 | |||||||||
WBsf227951 | |||||||||
WBsf227952 | |||||||||
Experimental_info | RNAi_result | WBRNAi00011634 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041937 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016741 | ||||||||
Expr1145944 | |||||||||
Expr2001417 | |||||||||
Expr2019640 | |||||||||
Drives_construct | WBCnstr00028077 | ||||||||
Construct_product | WBCnstr00028077 | ||||||||
Microarray_results | SMD_C34H4.2 | ||||||||
183115_at | |||||||||
A_12_P109743 | |||||||||
A_12_P163098 | |||||||||
Aff_C34H4.2 | |||||||||
GPL13394_WBGene00016425 | |||||||||
GPL13914_C34H4.2 | |||||||||
GPL14144_C34H4.2_130-189_0.867_61_B | |||||||||
GPL14144_C34H4.2_438-497_0.855_69_C | |||||||||
GPL14144_C34H4.2_524-583_0.906_36_A | |||||||||
GPL19516_CGZ0007621 | |||||||||
GPL21109_C34H4.2 | |||||||||
GPL3518_CE31328 | |||||||||
GPL8304_CE_WBGene00016425_A | |||||||||
GPL8304_CE_WBGene00016425_B | |||||||||
GPL8673_C34H4_2P00266 | |||||||||
GPL8673_C34H4_2P00648 | |||||||||
GPL8673_C34H4_2P01014 | |||||||||
GPL9450_C34H4.2 | |||||||||
cea2.c.26760 | |||||||||
Expression_cluster (296) | |||||||||
Interaction (11) | |||||||||
Map_info | Positive | Positive_clone | C34H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | -18.0798 | |||||||
Reference | WBPaper00058665 | ||||||||
Method | Gene |