WormBase Tree Display for Gene: WBGene00016408
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WBGene00016408 | SMap | S_parent | Sequence | C34E10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | prmt-5 | Person_evidence | WBPerson4055 | |||
Sequence_name | C34E10.5 | ||||||
Molecular_name | C34E10.5 | ||||||
C34E10.5.1 | |||||||
CE29033 | |||||||
C34E10.5.2 | |||||||
C34E10.5.3 | |||||||
Other_name | tag-251 | Person_evidence | WBPerson201 | ||||
CELE_C34E10.5 | Accession_evidence | NDB | BX284603 | ||||
Public_name | prmt-5 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | prmt | ||||||
Allele (48) | |||||||
Strain | WBStrain00036097 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (42) | |||||||
Contained_in_operon | CEOP3268 | ||||||
Ortholog (36) | |||||||
Structured_description | Automated_description | Enables DNA-binding transcription factor binding activity; p53 binding activity; and protein methyltransferase activity. Involved in several processes, including intrinsic apoptotic signaling pathway in response to DNA damage; negative regulation of DNA damage response, signal transduction by p53 class mediator; and response to odorant. Located in nucleus. Human ortholog(s) of this gene implicated in Leydig cell tumor and seminoma. Is an ortholog of human PRMT5 (protein arginine methyltransferase 5). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:2696 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10894) | ||
DOID:4440 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10894) | ||||
Molecular_info | Corresponding_CDS | C34E10.5 | |||||
Corresponding_transcript | C34E10.5.1 | ||||||
C34E10.5.2 | |||||||
C34E10.5.3 | |||||||
Other_sequence (21) | |||||||
Associated_feature | WBsf658920 | ||||||
WBsf224888 | |||||||
Experimental_info | RNAi_result (15) | ||||||
Expr_pattern | Expr1018696 | ||||||
Expr1037030 | |||||||
Expr1145902 | |||||||
Expr2015099 | |||||||
Expr2033337 | |||||||
Drives_construct | WBCnstr00028094 | ||||||
Construct_product | WBCnstr00028094 | ||||||
Antibody | WBAntibody00002111 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (88) | |||||||
Interaction (111) | |||||||
Map_info | Map | III | Position | -1.87136 | Error | 0.010434 | |
Positive | Positive_clone | C34E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5207 | |||||
4167 | |||||||
Pseudo_map_position | |||||||
Reference (17) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |