WormBase Tree Display for Gene: WBGene00016400

WBGene00016400 SMap: S_parent: Sequence: C34D4
  Identity: Version: 1
    Name: Sequence_name: C34D4.4
      Molecular_name: C34D4.4
        C34D4.4.1
        CE39683
      Other_name: CELE_C34D4.4 Accession_evidence: NDB BX284604
      Public_name: C34D4.4
    DB_info: Database: AceView gene 4H913
        WormQTL gene WBGene00016400
        WormFlux gene WBGene00016400
        NDB locus_tag CELE_C34D4.4
        Panther gene CAEEL|WormBase=WBGene00016400|UniProtKB=Q18449
          family PTHR13019
        NCBI gene 183205
        RefSeq protein NM_001380313.3
        SwissProt UniProtAcc Q18449
        UniProt_GCRP UniProtAcc Q18449
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (16)
    RNASeq_FPKM (74)
    GO_annotation: 00061273
      00061274
      00061275
      00061276
      00122038
    Ortholog: WBGene00028167 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00071223 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00131949 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00154485 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222832 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10732 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1482 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15474 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2262 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19777 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3205 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3483 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1042 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g462 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g18722 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_IV.g13721 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21109 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01049.g17951 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06552 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013855 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02935 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16306 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40291000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10768 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00246706 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257073 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294401 Trichuris muris From_analysis: WormBase-Compara
      WBGene00297077 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002491 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0035944 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-235 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050522-404 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:20399 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:30453 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:20398 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:42961 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914760 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:3665441 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1566405 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1586539 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to be involved in protein secretion and vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of human TVP23A (trans-golgi network vesicle protein 23 homolog A) and TVP23B (trans-golgi network vesicle protein 23 homolog B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34D4.4
    Corresponding_CDS_history: C34D4.4:wp154
      C34D4.4a:wp240
      C34D4.4b:wp240
    Corresponding_transcript: C34D4.4.1
    Other_sequence (47)
    Associated_feature: WBsf646065
      WBsf996902
      WBsf1017665
      WBsf228503
      WBsf228504
      WBsf228505
      WBsf228506
  Experimental_info: RNAi_result: WBRNAi00011599 Inferred_automatically: RNAi_primary
      WBRNAi00029523 Inferred_automatically: RNAi_primary
      WBRNAi00041876 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015266
      Expr1037025
      Expr1145893
      Expr2001396
      Expr2019619
    Drives_construct: WBCnstr00028101
    Construct_product: WBCnstr00028101
    Microarray_results (22)
    Expression_cluster (91)
    Interaction: WBInteraction000046316
      WBInteraction000281004
      WBInteraction000288434
      WBInteraction000395193
      WBInteraction000449916
      WBInteraction000580956
  Map_info: Positive: Positive_clone: C34D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 3.29094
  Reference: WBPaper00035925
    WBPaper00038491
    WBPaper00055090
    WBPaper00057849
  Method: Gene