WormBase Tree Display for Gene: WBGene00016399
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| WBGene00016399 | SMap | S_parent | Sequence | C34D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C34D4.3 | |||||||
| Molecular_name | C34D4.3 | ||||||||
| C34D4.3.1 | |||||||||
| CE06924 | |||||||||
| Other_name | CELE_C34D4.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C34D4.3 | ||||||||
| DB_info | Database | AceView | gene | 4H919 | |||||
| WormQTL | gene | WBGene00016399 | |||||||
| WormFlux | gene | WBGene00016399 | |||||||
| NDB | locus_tag | CELE_C34D4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016399|UniProtKB=Q18451 | |||||||
| family | PTHR22947 | ||||||||
| NCBI | gene | 177488 | |||||||
| RefSeq | protein | NM_068723.5 | |||||||
| TrEMBL | UniProtAcc | Q18451 | |||||||
| UniProt_GCRP | UniProtAcc | Q18451 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (33) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including NSM; amphid sheath cell; germ line; intestine; and sperm based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-one chemicals including Heme; Ethanol; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34D4.3 | |||||||
| Corresponding_transcript | C34D4.3.1 | ||||||||
| Other_sequence | CSC01723_1 | ||||||||
| CBC11187_1 | |||||||||
| CJC00130_1 | |||||||||
| FD516717.1 | |||||||||
| Associated_feature | WBsf228507 | ||||||||
| WBsf228508 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041875 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029522 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014893 | ||||||||
| Expr1145892 | |||||||||
| Expr2001395 | |||||||||
| Expr2019618 | |||||||||
| Drives_construct | WBCnstr00028102 | ||||||||
| Construct_product | WBCnstr00028102 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction (109) | |||||||||
| Map_info | Positive | Positive_clone | C34D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.29099 | |||||||
| Method | Gene |
