WormBase Tree Display for Gene: WBGene00016397
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| WBGene00016397 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | maph-9 | Paper_evidence | WBPaper00050511 | |||||
| Person_evidence | WBPerson2136 | ||||||||
| Sequence_name | C34D4.1 | ||||||||
| Molecular_name | C34D4.1 | ||||||||
| C34D4.1.1 | |||||||||
| CE27742 | |||||||||
| C34D4.1.2 | |||||||||
| Other_name | CELE_C34D4.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | maph-9 | ||||||||
| DB_info | Database | AceView | gene | 4H923 | |||||
| WormQTL | gene | WBGene00016397 | |||||||
| WormFlux | gene | WBGene00016397 | |||||||
| NDB | locus_tag | CELE_C34D4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016397|UniProtKB=Q18452 | |||||||
| family | PTHR14739 | ||||||||
| NCBI | gene | 177490 | |||||||
| RefSeq | protein | NM_068725.6 | |||||||
| SwissProt | UniProtAcc | Q18452 | |||||||
| TREEFAM | TREEFAM_ID | TF318365 | |||||||
| UniProt_GCRP | UniProtAcc | Q18452 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Jan 2017 19:39:04 | WBPerson2970 | Name_change | CGC_name | maph-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | maph | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00002886 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog | WBGene00130611 | Caenorhabditis japonica | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WBGene00028169 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
| OrthoMCL | |||||||||
| OMA | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00071226 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| Cni-C34D4.1 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g10772 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| ZFIN:ZDB-GENE-080225-36 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
| Inparanoid | |||||||||
| OMA | |||||||||
| Panther | |||||||||
| SonicParanoid | |||||||||
| HGNC:26118 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||||
| Panther | |||||||||
| MGI:2442208 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||||
| OMA | |||||||||
| Panther | |||||||||
| PhylomeDB | |||||||||
| RGD:1560368 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||||
| OMA | |||||||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to enable microtubule binding activity. Predicted to be involved in mitotic spindle assembly and regulation of mitotic cytokinesis. Located in axoneme and ciliary base. Expressed in chemosensory neurons and ciliated neurons. Is an ortholog of human MAP9 (microtubule associated protein 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34D4.1 | |||||||
| Corresponding_transcript | C34D4.1.1 | ||||||||
| C34D4.1.2 | |||||||||
| Associated_feature | WBsf646066 | ||||||||
| WBsf660266 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041865 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011592 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3171 | ||||||||
| Expr5418 | |||||||||
| Expr13195 | |||||||||
| Expr1013160 | |||||||||
| Expr1037024 | |||||||||
| Expr1145884 | |||||||||
| Expr2013379 | |||||||||
| Expr2031611 | |||||||||
| Drives_construct | WBCnstr00003405 | ||||||||
| WBCnstr00011191 | |||||||||
| WBCnstr00028104 | |||||||||
| Construct_product | WBCnstr00011191 | ||||||||
| WBCnstr00028104 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | IV | Position | 3.29106 | |||||
| Positive | Positive_clone | C34D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063946 | |||||||||
| WBPaper00066290 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
