WormBase Tree Display for Gene: WBGene00016367
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| WBGene00016367 | SMap | S_parent | Sequence | C33G8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-162 | Person_evidence | WBPerson600 | |||||
| Sequence_name | C33G8.10 | ||||||||
| Molecular_name | C33G8.10 | ||||||||
| C33G8.10.1 | |||||||||
| CE06919 | |||||||||
| Other_name | CELE_C33G8.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-162 | ||||||||
| DB_info | Database | AceView | gene | 5H470 | |||||
| WormQTL | gene | WBGene00016367 | |||||||
| WormFlux | gene | WBGene00016367 | |||||||
| NDB | locus_tag | CELE_C33G8.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016367|UniProtKB=Q18395 | |||||||
| family | PTHR46800 | ||||||||
| NCBI | gene | 183181 | |||||||
| RefSeq | protein | NM_072368.2 | |||||||
| TREEFAM | TREEFAM_ID | TF319262 | |||||||
| TrEMBL | UniProtAcc | Q18395 | |||||||
| UniProt_GCRP | UniProtAcc | Q18395 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-162 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (31) | |||||||||
| Strain | WBStrain00036846 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061055 | ||||||||
| 00061056 | |||||||||
| 00061057 | |||||||||
| 00061058 | |||||||||
| 00122002 | |||||||||
| 00122003 | |||||||||
| 00122004 | |||||||||
| 00122005 | |||||||||
| Contained_in_operon | CEOP5136 | ||||||||
| Ortholog (19) | |||||||||
| Paralog (216) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C33G8.10 | |||||||
| Corresponding_transcript | C33G8.10.1 | ||||||||
| Other_sequence | MH07215 | ||||||||
| Associated_feature | WBsf716592 | ||||||||
| WBsf233886 | |||||||||
| Transcription_factor | WBTranscriptionFactor000291 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00011552 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029476 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041790 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026242 | ||||||||
| Expr1037007 | |||||||||
| Expr1145807 | |||||||||
| Expr2014062 | |||||||||
| Expr2032302 | |||||||||
| Drives_construct | WBCnstr00028126 | ||||||||
| Construct_product | WBCnstr00016844 | ||||||||
| WBCnstr00028126 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction | WBInteraction000226653 | ||||||||
| WBInteraction000271224 | |||||||||
| WBInteraction000526903 | |||||||||
| WBInteraction000547426 | |||||||||
| Map_info | Map | V | Position | 0.493351 | Error | 0.000721 | |||
| Positive | Positive_clone | C33G8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
