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WormBase Tree Display for Gene: WBGene00016340

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Name Class

WBGene00016340SMapS_parentSequenceC33C12
IdentityVersion2
NameCGC_namegba-2Person_evidenceWBPerson17187
Sequence_nameC33C12.8
Molecular_nameC33C12.8
C33C12.8.1
CE41877
Other_nameCELE_C33C12.8Accession_evidenceNDBBX284602
Public_namegba-2
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
202 Mar 2012 16:42:47WBPerson2970Name_changeCGC_namegba-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgba
Allele (262)
RNASeq_FPKM (74)
GO_annotation00028314
00028315
00028316
00028317
00028318
00028319
00028320
00028321
00121976
00121977
Contained_in_operonCEOP2064
OrthologWBGene00036818Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00036823Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00067031Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00160066Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00156414Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00226542Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7140Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5997Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g21481Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20243Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16997Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25623Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g8460Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g16384Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17479Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29745Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29746Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5472Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01804.g16748Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g21880Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold517.g2731Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01321.g20090Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09873Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004040Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03296Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13617Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11635Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g13149Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2786Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g3609Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239911Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00092275Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100044Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280881Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304986Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00262851Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293391Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0051148Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
FB:FBgn0051414Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
OMA
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-100922-270Danio rerioFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
Panther
MGI:95665Mus musculusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
Panther
RGD:1589149Rattus norvegicusFrom_analysisEnsEMBL-Compara
OMA
OrthoFinder
Panther
ParalogWBGene00008706Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016335Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021160Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable glucosylceramidase activity. Predicted to be involved in glucosylceramide catabolic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC33C12.8
Corresponding_CDS_historyC33C12.8:wp185
Corresponding_transcriptC33C12.8.1
Associated_featureWBsf986897
WBsf986898
WBsf986899
WBsf986900
WBsf1011687
WBsf222751
Experimental_infoRNAi_resultWBRNAi00041744Inferred_automaticallyRNAi_primary
WBRNAi00011521Inferred_automaticallyRNAi_primary
WBRNAi00029460Inferred_automaticallyRNAi_primary
Expr_patternExpr1023923
Expr1145765
Expr2011951
Expr2030188
Microarray_results (18)
Expression_cluster (159)
InteractionWBInteraction000032408
WBInteraction000209505
WBInteraction000255093
WBInteraction000284213
WBInteraction000305809
WBInteraction000358606
WBInteraction000407039
Map_infoMapIIPosition-13.8408
PositivePositive_cloneC33C12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00055090
WBPaper00059755
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene