WormBase Tree Display for Gene: WBGene00016329
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| WBGene00016329 | Evidence | Paper_evidence | WBPaper00013472 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C32E12 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | osr-1 | Person_evidence | WBPerson434 | |||||
| Sequence_name | C32E12.3 | ||||||||
| Molecular_name | C32E12.3 | ||||||||
| C32E12.3.1 | |||||||||
| CE30495 | |||||||||
| Other_name | CELE_C32E12.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | osr-1 | ||||||||
| DB_info | Database | AceView | gene | 1F768 | |||||
| WormQTL | gene | WBGene00016329 | |||||||
| WormFlux | gene | WBGene00016329 | |||||||
| NDB | locus_tag | CELE_C32E12.3 | |||||||
| NCBI | gene | 172161 | |||||||
| RefSeq | protein | NM_059144.7 | |||||||
| TrEMBL | UniProtAcc | G5EEJ4 | |||||||
| UniProt_GCRP | UniProtAcc | G5EEJ4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | osr | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00003470 | ||||||||
| WBStrain00031740 | |||||||||
| WBStrain00000175 | |||||||||
| WBStrain00004716 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Structured_description | Automated_description | Enriched in ABalpapaap; ABarappaap; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by twenty-one chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C32E12.3 | |||||||
| Corresponding_transcript | C32E12.3.1 | ||||||||
| Other_sequence | Oden_isotig16363 | ||||||||
| FC809677.1 | |||||||||
| Dviv_isotig29674 | |||||||||
| SRC02762_1 | |||||||||
| SRC00417_1 | |||||||||
| Oden_isotig16364 | |||||||||
| SR02614 | |||||||||
| Associated_feature | WBsf649148 | ||||||||
| WBsf219383 | |||||||||
| WBsf219384 | |||||||||
| WBsf219385 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Chronogram395 | ||||||||
| Chronogram410 | |||||||||
| Expr2781 | |||||||||
| Expr2966 | |||||||||
| Expr5399 | |||||||||
| Expr1028844 | |||||||||
| Expr1036989 | |||||||||
| Expr1145702 | |||||||||
| Expr2014649 | |||||||||
| Expr2032882 | |||||||||
| Drives_construct | WBCnstr00003931 | ||||||||
| WBCnstr00010948 | |||||||||
| WBCnstr00011051 | |||||||||
| WBCnstr00028154 | |||||||||
| Construct_product | WBCnstr00028154 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (186) | |||||||||
| Interaction (155) | |||||||||
| Anatomy_function | WBbtf0321 | ||||||||
| WBbtf0322 | |||||||||
| WBbtf0323 | |||||||||
| WBbtf0324 | |||||||||
| WBbtf0325 | |||||||||
| WBbtf0326 | |||||||||
| WBbtf0327 | |||||||||
| WBbtf0328 | |||||||||
| WBbtf0329 | |||||||||
| Map_info | Map | I | Position | -0.275015 | Error | 0.003642 | |||
| Positive | Positive_clone | C32E12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4850 | |||||||
| 4817 | |||||||||
| 4687 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (22) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
