WormBase Tree Display for Gene: WBGene00016277
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| WBGene00016277 | SMap | S_parent | Sequence | C30G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C30G12.6 | |||||||
| Molecular_name | C30G12.6a | ||||||||
| C30G12.6a.1 | |||||||||
| CE54027 | |||||||||
| C30G12.6b | |||||||||
| CE53810 | |||||||||
| C30G12.6b.1 | |||||||||
| Other_name | CELE_C30G12.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C30G12.6 | ||||||||
| DB_info | Database | AceView | gene | 2H584 | |||||
| WormQTL | gene | WBGene00016277 | |||||||
| WormFlux | gene | WBGene00016277 | |||||||
| NDB | locus_tag | CELE_C30G12.6 | |||||||
| NCBI | gene | 174196 | |||||||
| RefSeq | protein | NM_001377815.2 | |||||||
| NM_001377814.3 | |||||||||
| SwissProt | UniProtAcc | Q09259 | |||||||
| UniProt_GCRP | UniProtAcc | Q09259 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (57) | |||||||||
| Strain | WBStrain00032536 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2292 | ||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpapapa; ABplpppapa; RID; germ line; and head mesodermal cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including skn-1; age-1; and hsf-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including manganese chloride; D-glucose; and bisphenol S based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Armadillo-type fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C30G12.6a | |||||||
| C30G12.6b | |||||||||
| Corresponding_CDS_history | C30G12.6a:wp274 | ||||||||
| C30G12.6b:wp274 | |||||||||
| Corresponding_transcript | C30G12.6a.1 | ||||||||
| C30G12.6b.1 | |||||||||
| Other_sequence | CBC13048_1 | ||||||||
| CRC06618_1 | |||||||||
| CR08997 | |||||||||
| CR04649 | |||||||||
| CRC07268_1 | |||||||||
| Associated_feature | WBsf665680 | ||||||||
| WBsf988393 | |||||||||
| WBsf223319 | |||||||||
| WBsf223320 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000629 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007789 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077855 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011395 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041564 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021727 | ||||||||
| Expr1036964 | |||||||||
| Expr1145583 | |||||||||
| Expr2001261 | |||||||||
| Expr2019483 | |||||||||
| Drives_construct | WBCnstr00028197 | ||||||||
| Construct_product | WBCnstr00028197 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000217131 | ||||||||
| WBInteraction000565846 | |||||||||
| WBInteraction000568442 | |||||||||
| Map_info | Positive | Positive_clone | C30G12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.500128 | |||||||
| Reference | WBPaper00032961 | ||||||||
| WBPaper00048917 | |||||||||
| Method | Gene |
