WormBase Tree Display for Gene: WBGene00016265
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| WBGene00016265 | SMap | S_parent | Sequence | C30F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | trhr-1 | Person_evidence | WBPerson6671 | |||||
| WBPerson20228 | |||||||||
| Sequence_name | C30F12.6 | ||||||||
| Molecular_name | C30F12.6 | ||||||||
| C30F12.6.1 | |||||||||
| CE16886 | |||||||||
| Other_name | nmur-4 | Person_evidence | WBPerson11 | ||||||
| CELE_C30F12.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | trhr-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Apr 2010 14:03:06 | WBPerson2970 | Name_change | CGC_name | nmur-4 | ||||
| 3 | 29 Nov 2016 11:06:22 | WBPerson2970 | Name_change | CGC_name | trhr-1 | ||||
| Other_name | nmur-4 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trhr | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00031983 | ||||||||
| WBStrain00055134 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089906 | ||||||||
| 00089907 | |||||||||
| 00089908 | |||||||||
| 00089909 | |||||||||
| 00121924 | |||||||||
| 00121925 | |||||||||
| 00121926 | |||||||||
| 00121927 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00006864 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00013782 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018089 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020086 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable thyrotropin-releasing hormone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in pm4 and pm5. Human ortholog(s) of this gene implicated in congenital nongoitrous hypothyroidism 7 and hypertension. Is an ortholog of human TRHR (thyrotropin releasing hormone receptor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111836 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12299) | ||||
| DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12299) | ||||||
| Molecular_info | Corresponding_CDS | C30F12.6 | |||||||
| Corresponding_transcript | C30F12.6.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf656460 | ||||||||
| WBsf717515 | |||||||||
| WBsf984044 | |||||||||
| WBsf984045 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003041 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00072195 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110477 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072832 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072833 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041551 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029359 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110476 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram731 | ||||||||
| Expr5389 | |||||||||
| Expr13941 | |||||||||
| Expr1020039 | |||||||||
| Expr1036960 | |||||||||
| Expr1145569 | |||||||||
| Expr2017494 | |||||||||
| Expr2035633 | |||||||||
| Drives_construct | WBCnstr00004072 | ||||||||
| WBCnstr00028206 | |||||||||
| WBCnstr00040461 | |||||||||
| Construct_product | WBCnstr00028206 | ||||||||
| WBCnstr00040461 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction | WBInteraction000148820 | ||||||||
| WBInteraction000166943 | |||||||||
| WBInteraction000221277 | |||||||||
| WBInteraction000248487 | |||||||||
| WBInteraction000267932 | |||||||||
| WBInteraction000352702 | |||||||||
| WBInteraction000503757 | |||||||||
| Map_info | Map | I | Position | 1.59206 | Error | 0.009201 | |||
| Positive | Positive_clone | C30F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
