WormBase Tree Display for Gene: WBGene00016233

WBGene00016233 SMap: S_parent: Sequence: C29G2
  Identity: Version: 3
    Name: CGC_name: nhr-290 Person_evidence: WBPerson260
      Sequence_name: C29G2.5
      Molecular_name: C29G2.5
        C29G2.5.1
        CE36795
      Other_name: srt-58
        CELE_C29G2.5 Accession_evidence: NDB BX284605
      Public_name: nhr-290
    DB_info: Database: AceView gene 5D53
        WormQTL gene WBGene00016233
        WormFlux gene WBGene00016233
        NDB locus_tag CELE_C29G2.5
        Panther gene CAEEL|WormBase=WBGene00016233|UniProtKB=O16884
          family PTHR46397
        NCBI gene 183034
        RefSeq protein NM_071304.3
        TREEFAM TREEFAM_ID TF315399
        TrEMBL UniProtAcc O16884
        UniProt_GCRP UniProtAcc O16884
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Dec 2004 09:41:19 WBPerson2970 Name_change: CGC_name: srt-58
        3 06 Feb 2019 16:53:24 WBPerson1983 Name_change: CGC_name: nhr-290
                Other_name: srt-58
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (34)
    RNASeq_FPKM (74)
    GO_annotation: 00028854
      00028855
      00028856
      00121897
      00121898
      00121899
      00121900
    Ortholog: WBGene00141854 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00145647 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00149649 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00142727 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00056802 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00223242 Brugia malayi From_analysis: WormBase-Compara
      CSP31.g10593 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP39.g24037 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      WBGene00242085 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00288616 Trichuris muris From_analysis: WormBase-Compara
    Paralog (281)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29G2.5
    Corresponding_CDS_history: C29G2.5:wp125
      C29G2.5:wp137
      C29G2.5:wp188
      C29G2.5:wp240
      C29G2.5:wp250
    Corresponding_transcript: C29G2.5.1
    Transcription_factor: WBTranscriptionFactor000768
  Experimental_info: RNAi_result: WBRNAi00011364 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015832
      Expr1145531
      Expr2016679
      Expr2034865
    Microarray_results: SMD_C29G2.5
      GPL3518_CE08466
      GPL8673_C29G2_5P00321
    Expression_cluster (19)
    Interaction: WBInteraction000143743
      WBInteraction000270422
      WBInteraction000325789
      WBInteraction000367912
      WBInteraction000425527
      WBInteraction000448053
  Map_info: Map: V Position: -14.1266 Error: 0.086407
    Positive: Positive_clone: C29G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4922
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene