WormBase Tree Display for Gene: WBGene00016224
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WBGene00016224 | SMap | S_parent | Sequence | C29F9 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | ||||||||
Name | CGC_name | fbxa-57 | Person_evidence | WBPerson655 | ||||||
Sequence_name | C29F9.10 | |||||||||
Molecular_name | C29F9.10 | |||||||||
Other_name | CELE_C29F9.10 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | fbxa-57 | |||||||||
DB_info | Database | AceView | gene | 3A724 | ||||||
WormQTL | gene | WBGene00016224 | ||||||||
WormFlux | gene | WBGene00016224 | ||||||||
NDB | locus_tag | CELE_C29F9.10 | ||||||||
NCBI | gene | 175176 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-57 | |||||
3 | 18 Feb 2016 15:24:40 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | fbxa | |||||||||
Allele (76) | ||||||||||
Strain | WBStrain00003581 | |||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog (14) | ||||||||||
Paralog (101) | ||||||||||
Structured_description | Automated_description | Is affected by several genes including daf-16; daf-2; and hsf-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including tryptophan; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | C29F9.10:wp151 | ||||||||
C29F9.10:wp252 | ||||||||||
Corresponding_pseudogene | C29F9.10 | |||||||||
Associated_feature | WBsf226084 | |||||||||
Experimental_info | Expr_pattern | Chronogram830 | ||||||||
Expr5378 | ||||||||||
Expr1019662 | ||||||||||
Expr1145515 | ||||||||||
Drives_construct | WBCnstr00004033 | |||||||||
Microarray_results | SMD_C29F9.10 | |||||||||
SMD_C29F9.10:2 | ||||||||||
172596_x_at | ||||||||||
172600_x_at | ||||||||||
Aff_C29F9.10 | ||||||||||
GPL14144_C29F9.10_206-265_0.933_2_A | ||||||||||
Expression_cluster (66) | ||||||||||
Interaction | WBInteraction000152816 | |||||||||
WBInteraction000271883 | ||||||||||
WBInteraction000355612 | ||||||||||
WBInteraction000378857 | ||||||||||
WBInteraction000435621 | ||||||||||
WBInteraction000454337 | ||||||||||
Map_info | Map | III | Position | -26.985 | ||||||
Positive | Positive_clone | C29F9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |