WormBase Tree Display for Gene: WBGene00016199
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| WBGene00016199 | SMap | S_parent | Sequence | C28H8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C28H8.8 | |||||||
| Molecular_name | C28H8.8 | ||||||||
| C28H8.8.1 | |||||||||
| CE38944 | |||||||||
| Other_name | CELE_C28H8.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C28H8.8 | ||||||||
| DB_info | Database | AceView | gene | 3G976 | |||||
| WormQTL | gene | WBGene00016199 | |||||||
| WormFlux | gene | WBGene00016199 | |||||||
| NDB | locus_tag | CELE_C28H8.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016199|UniProtKB=Q09246 | |||||||
| family | PTHR22989 | ||||||||
| NCBI | gene | 182998 | |||||||
| RefSeq | protein | NM_065878.3 | |||||||
| SwissProt | UniProtAcc | Q09246 | |||||||
| TREEFAM | TREEFAM_ID | TF316021 | |||||||
| UniProt_GCRP | UniProtAcc | Q09246 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Enriched in MSaapapa; MSpapapa; and tail hypodermis based on single-cell RNA-seq studies. Is affected by several genes including let-60; eat-2; and clk-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including Tunicamycin; multi-walled carbon nanotube; and Alovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Methyltransferase FkbM domain and Methyltransferase FkbM. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C28H8.8 | |||||||
| Corresponding_CDS_history | C28H8.8:wp146 | ||||||||
| Corresponding_transcript | C28H8.8.1 | ||||||||
| Other_sequence | Tcir_isotig08604 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029307 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007064 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041433 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011316 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041435 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012061 | ||||||||
| Expr1145464 | |||||||||
| Expr2001209 | |||||||||
| Expr2019431 | |||||||||
| Drives_construct | WBCnstr00028251 | ||||||||
| Construct_product | WBCnstr00028251 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (56) | |||||||||
| Interaction | WBInteraction000197001 | ||||||||
| WBInteraction000230593 | |||||||||
| WBInteraction000243221 | |||||||||
| WBInteraction000251236 | |||||||||
| WBInteraction000257462 | |||||||||
| WBInteraction000322827 | |||||||||
| WBInteraction000379762 | |||||||||
| WBInteraction000389804 | |||||||||
| Map_info | Positive | Positive_clone | C28H8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -1.43672 | |||||||
| Method | Gene |
