WormBase Tree Display for Gene: WBGene00016171
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| WBGene00016171 | SMap | S_parent | Sequence | C27F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C27F2.10 | |||||||
| Molecular_name | C27F2.10 | ||||||||
| C27F2.10.1 | |||||||||
| CE29189 | |||||||||
| Other_name | CELE_C27F2.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C27F2.10 | ||||||||
| DB_info | Database | AceView | gene | 3G76 | |||||
| WormQTL | gene | WBGene00016171 | |||||||
| WormFlux | gene | WBGene00016171 | |||||||
| NDB | locus_tag | CELE_C27F2.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016171|UniProtKB=Q95QU0 | |||||||
| family | PTHR12732 | ||||||||
| NCBI | gene | 175675 | |||||||
| RefSeq | protein | NM_065656.9 | |||||||
| SwissProt | UniProtAcc | Q95QU0 | |||||||
| TREEFAM | TREEFAM_ID | TF106136 | |||||||
| UniProt_GCRP | UniProtAcc | Q95QU0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| Strain | WBStrain00002042 | ||||||||
| WBStrain00002506 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088623 | ||||||||
| 00088624 | |||||||||
| 00088625 | |||||||||
| 00088626 | |||||||||
| 00088627 | |||||||||
| 00088628 | |||||||||
| 00121863 | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity and double-stranded DNA binding activity. Predicted to be involved in poly(A)+ mRNA export from nucleus; post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery; and transcription elongation by RNA polymerase II. Predicted to be part of transcription export complex 2. Is an ortholog of human PCID2 (PCI domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C27F2.10 | |||||||
| Corresponding_transcript | C27F2.10.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf651026 | ||||||||
| WBsf992263 | |||||||||
| WBsf1014825 | |||||||||
| WBsf226621 | |||||||||
| WBsf226622 | |||||||||
| WBsf226623 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00068054 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00068011 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067104 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00068771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041358 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00068772 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008451 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008017 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024655 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1197 | ||||||||
| Expr5361 | |||||||||
| Expr1023709 | |||||||||
| Expr1036922 | |||||||||
| Expr1145397 | |||||||||
| Expr2001178 | |||||||||
| Expr2019400 | |||||||||
| Drives_construct | WBCnstr00002826 | ||||||||
| WBCnstr00004435 | |||||||||
| WBCnstr00028275 | |||||||||
| Construct_product | WBCnstr00028275 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction (41) | |||||||||
| Map_info | Positive | Positive_clone | C27F2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -2.2724 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061947 | |||||||||
| Method | Gene |
