WormBase Tree Display for Gene: WBGene00016149
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| WBGene00016149 | SMap | S_parent | Sequence | C26F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | frpr-3 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C26F1.6 | ||||||||
| Molecular_name | C26F1.6 | ||||||||
| C26F1.6.1 | |||||||||
| CE06880 | |||||||||
| Other_name | CELE_C26F1.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | frpr-3 | ||||||||
| DB_info | Database | AceView | gene | 5I249 | |||||
| WormQTL | gene | WBGene00016149 | |||||||
| WormFlux | gene | WBGene00016149 | |||||||
| NDB | locus_tag | CELE_C26F1.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016149|UniProtKB=G5EG36 | |||||||
| family | PTHR47323 | ||||||||
| NCBI | gene | 182942 | |||||||
| RefSeq | protein | NM_072603.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316702 | |||||||
| TrEMBL | UniProtAcc | G5EG36 | |||||||
| UniProt_GCRP | UniProtAcc | G5EG36 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Dec 2011 16:46:04 | WBPerson2970 | Name_change | CGC_name | frpr-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | frpr | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00037411 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00019435 | ||||||||
| 00019436 | |||||||||
| 00019437 | |||||||||
| 00019438 | |||||||||
| 00121836 | |||||||||
| 00121837 | |||||||||
| 00121838 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Concise_description | C26F1.6 encodes a homolog of the functionally active Fmrf Receptor (FR; CG2114) of D. melanogaster; it is thus possible that C26F1.6 is a receptor for one of the FMRF-like neurotransmitters in C. elegans (e.g., FLP-1 through FLP-12). | Paper_evidence | WBPaper00013175 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Expressed in head neurons and nerve ring. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26F1.6 | |||||||
| Corresponding_transcript | C26F1.6.1 | ||||||||
| Other_sequence | FC543087.1 | ||||||||
| JI180540.1 | |||||||||
| ACC02412_1 | |||||||||
| Acan_isotig09697 | |||||||||
| FC545929.1 | |||||||||
| FC543205.1 | |||||||||
| Associated_feature | WBsf1000510 | ||||||||
| WBsf1000511 | |||||||||
| WBsf1019949 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011224 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029240 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041284 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00075435 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12803 | ||||||||
| Expr14688 | |||||||||
| Expr1021481 | |||||||||
| Expr1145325 | |||||||||
| Expr2011904 | |||||||||
| Expr2030141 | |||||||||
| Drives_construct | WBCnstr00022670 | ||||||||
| WBCnstr00022783 | |||||||||
| WBCnstr00028290 | |||||||||
| WBCnstr00041289 | |||||||||
| Construct_product | WBCnstr00022670 | ||||||||
| WBCnstr00028290 | |||||||||
| WBCnstr00041289 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (78) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | V | Position | 0.883111 | |||||
| Positive | Positive_clone | C26F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006132 | ||||||||
| WBPaper00024457 | |||||||||
| WBPaper00025186 | |||||||||
| WBPaper00047697 | |||||||||
| WBPaper00051667 | |||||||||
| WBPaper00055102 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
