WormBase Tree Display for Gene: WBGene00016148
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| WBGene00016148 | SMap | S_parent | Sequence | C26F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C26F1.3 | |||||||
| Molecular_name | C26F1.3 | ||||||||
| C26F1.3.1 | |||||||||
| CE06877 | |||||||||
| Other_name | 5I259 | Accession_evidence | EMBL | AF303248 | |||||
| CELE_C26F1.3 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | C26F1.3 | ||||||||
| DB_info | Database | AceView | gene | 5I259 | |||||
| WormQTL | gene | WBGene00016148 | |||||||
| WormFlux | gene | WBGene00016148 | |||||||
| NDB | locus_tag | CELE_C26F1.3 | |||||||
| NCBI | gene | 179155 | |||||||
| RefSeq | protein | NM_072607.9 | |||||||
| SwissProt | UniProtAcc | Q18232 | |||||||
| UniProt_GCRP | UniProtAcc | Q18232 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5164 | ||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including AFD; M cell; body wall muscle cell; germ line; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by eight chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26F1.3 | |||||||
| Corresponding_transcript | C26F1.3.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf646956 | ||||||||
| WBsf232012 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00071827 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062010 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071542 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011221 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033588 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024643 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069435 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027189 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011173 | ||||||||
| Expr1036908 | |||||||||
| Expr1145322 | |||||||||
| Expr2001142 | |||||||||
| Expr2019363 | |||||||||
| Drives_construct | WBCnstr00028291 | ||||||||
| Construct_product | WBCnstr00028291 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (105) | |||||||||
| SAGE_tag | SAGE:ttgccaagag | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaattccaag | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ggcaacttgagcaaaat | Strand | Antisense | |||||||
| SAGE:ttgccaagagaatcaac | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ggcaacttga | Strand | Antisense | |||||||
| SAGE:aaattccaagaaggtcg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:tatttcaaatttctctt | Strand | Antisense | |||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | C26F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.89315 | |||||||
| Method | Gene |
