WormBase Tree Display for Gene: WBGene00016139
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| WBGene00016139 | SMap | S_parent | Sequence | C26E6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ntl-9 | Person_evidence | WBPerson150 | |||||
| Sequence_name | C26E6.3 | ||||||||
| Molecular_name | C26E6.3 | ||||||||
| C26E6.3.1 | |||||||||
| CE51248 | |||||||||
| Other_name | CELE_C26E6.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ntl-9 | ||||||||
| DB_info | Database | AceView | gene | 3G35 | |||||
| WormQTL | gene | WBGene00016139 | |||||||
| WormFlux | gene | WBGene00016139 | |||||||
| NDB | locus_tag | CELE_C26E6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016139|UniProtKB=Q18224 | |||||||
| family | PTHR12262 | ||||||||
| NCBI | gene | 175669 | |||||||
| RefSeq | protein | NM_001322583.4 | |||||||
| TREEFAM | TREEFAM_ID | TF105734 | |||||||
| TrEMBL | UniProtAcc | Q18224 | |||||||
| UniProt_GCRP | UniProtAcc | Q18224 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Nov 2011 15:06:26 | WBPerson2970 | Name_change | CGC_name | ntl-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ntl | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00032174 | ||||||||
| WBStrain00047623 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060599 | ||||||||
| 00060600 | |||||||||
| 00060601 | |||||||||
| 00060602 | |||||||||
| 00060603 | |||||||||
| 00121820 | |||||||||
| 00121821 | |||||||||
| Contained_in_operon | CEOP3244 | ||||||||
| Ortholog (39) | |||||||||
| Structured_description | Automated_description | Involved in hemidesmosome assembly. Predicted to be located in P-body. Predicted to be part of CCR4-NOT core complex. Expressed in gonad. Is an ortholog of human CNOT9 (CCR4-NOT transcription complex subunit 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C26E6.3 | |||||||
| Corresponding_CDS_history | C26E6.3:wp88 | ||||||||
| C26E6.3:wp252 | |||||||||
| Corresponding_transcript | C26E6.3.1 | ||||||||
| Other_sequence (71) | |||||||||
| Associated_feature | WBsf992251 | ||||||||
| WBsf992252 | |||||||||
| WBsf992253 | |||||||||
| WBsf1014820 | |||||||||
| WBsf1014821 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr4008 | ||||||||
| Expr1011729 | |||||||||
| Expr1036901 | |||||||||
| Expr1145312 | |||||||||
| Expr2014515 | |||||||||
| Expr2032754 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (34) | |||||||||
| Map_info | Map | III | Position | -2.32008 | |||||
| Positive | Positive_clone | C26E6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035946 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043886 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060662 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
