WormBase Tree Display for Gene: WBGene00016106
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| WBGene00016106 | SMap | S_parent | Sequence | C25F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | itm-2 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | C25F6.7 | ||||||||
| Molecular_name | C25F6.7a | ||||||||
| C25F6.7a.1 | |||||||||
| CE47150 | |||||||||
| C25F6.7b | |||||||||
| CE47465 | |||||||||
| C25F6.7b.1 | |||||||||
| Other_name | CELE_C25F6.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | itm-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | itm-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | itm | ||||||||
| Allele (57) | |||||||||
| Strain | WBStrain00055395 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022018 | ||||||||
| 00022019 | |||||||||
| 00022020 | |||||||||
| 00022021 | |||||||||
| 00022022 | |||||||||
| 00022023 | |||||||||
| 00022024 | |||||||||
| 00022025 | |||||||||
| Ortholog (43) | |||||||||
| Structured_description | Automated_description | Predicted to enable amyloid-beta binding activity. Predicted to be involved in negative regulation of amyloid precursor protein biosynthetic process. Predicted to be located in Golgi apparatus and plasma membrane. Human ortholog(s) of this gene implicated in ITM2B-related cerebral amyloid angiopathy 1 and ITM2B-related cerebral amyloid angiopathy 2. Is an ortholog of human ITM2B (integral membrane protein 2B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070030 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6174) | ||||
| DOID:0070029 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6174) | ||||||
| Molecular_info | Corresponding_CDS | C25F6.7a | |||||||
| C25F6.7b | |||||||||
| Corresponding_CDS_history | C25F6.7a:wp230 | ||||||||
| Corresponding_transcript | C25F6.7a.1 | ||||||||
| C25F6.7b.1 | |||||||||
| Other_sequence | CJC17783_1 | ||||||||
| CRC02953_1 | |||||||||
| FK802024.1 | |||||||||
| JO468261.1 | |||||||||
| CR10576 | |||||||||
| JI171535.1 | |||||||||
| Associated_feature | WBsf662307 | ||||||||
| WBsf718582 | |||||||||
| WBsf718583 | |||||||||
| WBsf1005265 | |||||||||
| WBsf1022952 | |||||||||
| WBsf235717 | |||||||||
| WBsf235718 | |||||||||
| WBsf235719 | |||||||||
| WBsf235720 | |||||||||
| WBsf235721 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041197 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022647 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020945 | ||||||||
| Expr1036879 | |||||||||
| Expr1145228 | |||||||||
| Expr2001086 | |||||||||
| Expr2019307 | |||||||||
| Drives_construct | WBCnstr00028321 | ||||||||
| Construct_product | WBCnstr00028321 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (239) | |||||||||
| Interaction | WBInteraction000170021 | ||||||||
| WBInteraction000170022 | |||||||||
| WBInteraction000388228 | |||||||||
| Map_info | Positive | Positive_clone | C25F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -5.30979 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064648 | |||||||||
| Method | Gene |
