WormBase Tree Display for Gene: WBGene00016088
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WBGene00016088 | SMap | S_parent | Sequence | C25B8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-266 | Person_evidence | WBPerson2531 | |||
Sequence_name | C25B8.4 | ||||||
Molecular_name | C25B8.4a | ||||||
C25B8.4a.1 | |||||||
CE27087 | |||||||
C25B8.4b | |||||||
CE34259 | |||||||
C25B8.4c | |||||||
CE34260 | |||||||
C25B8.4b.1 | |||||||
C25B8.4c.1 | |||||||
Other_name | CELE_C25B8.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | clec-266 | ||||||
DB_info | Database | AceView | gene | XH236 | |||
WormQTL | gene | WBGene00016088 | |||||
WormFlux | gene | WBGene00016088 | |||||
NDB | locus_tag | CELE_C25B8.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00016088|UniProtKB=H2KZ07 | |||||
family | PTHR22802 | ||||||
NCBI | gene | 180932 | |||||
RefSeq | protein | NM_001029256.4 | |||||
NM_001392791.1 | |||||||
NM_001029257.5 | |||||||
TREEFAM | TREEFAM_ID | TF316271 | |||||
TrEMBL | UniProtAcc | H2KZ06 | |||||
H2KZ07 | |||||||
Q7Z121 | |||||||
UniProt_GCRP | UniProtAcc | H2KZ07 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (72) | |||||||
Strain | WBStrain00036366 | ||||||
WBStrain00051150 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00022014 | ||||||
00022015 | |||||||
00022016 | |||||||
Ortholog (45) | |||||||
Paralog (24) | |||||||
Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C25B8.4a | |||||
C25B8.4b | |||||||
C25B8.4c | |||||||
Corresponding_transcript | C25B8.4a.1 | ||||||
C25B8.4b.1 | |||||||
C25B8.4c.1 | |||||||
Other_sequence | GE625313.1 | ||||||
CRC04609_1 | |||||||
Oden_isotig22084 | |||||||
CR07117 | |||||||
GE626085.1 | |||||||
CRC05725_1 | |||||||
GE626570.1 | |||||||
GE625727.1 | |||||||
GE625068.1 | |||||||
Associated_feature (20) | |||||||
Experimental_info | RNAi_result | WBRNAi00041161 | Inferred_automatically | RNAi_primary | |||
WBRNAi00001487 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011147 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029183 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041162 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041164 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr12639 | ||||||
Expr1019626 | |||||||
Expr1036874 | |||||||
Expr1145193 | |||||||
Expr2010158 | |||||||
Expr2028401 | |||||||
Drives_construct | WBCnstr00022346 | ||||||
WBCnstr00028333 | |||||||
Construct_product | WBCnstr00022346 | ||||||
WBCnstr00028333 | |||||||
Microarray_results (32) | |||||||
Expression_cluster (351) | |||||||
Interaction (169) | |||||||
Map_info | Map | X | Position | -2.71813 | Error | 0.008827 | |
Positive | Positive_clone | C25B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031686 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |