WormBase Tree Display for Gene: WBGene00016088
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| WBGene00016088 | SMap | S_parent | Sequence | C25B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-266 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | C25B8.4 | ||||||||
| Molecular_name | C25B8.4a | ||||||||
| C25B8.4a.1 | |||||||||
| CE27087 | |||||||||
| C25B8.4b | |||||||||
| CE34259 | |||||||||
| C25B8.4c | |||||||||
| CE34260 | |||||||||
| C25B8.4b.1 | |||||||||
| C25B8.4c.1 | |||||||||
| Other_name | CELE_C25B8.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | clec-266 | ||||||||
| DB_info | Database | AceView | gene | XH236 | |||||
| WormQTL | gene | WBGene00016088 | |||||||
| WormFlux | gene | WBGene00016088 | |||||||
| NDB | locus_tag | CELE_C25B8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016088|UniProtKB=H2KZ07 | |||||||
| family | PTHR22802 | ||||||||
| NCBI | gene | 180932 | |||||||
| RefSeq | protein | NM_001029256.4 | |||||||
| NM_001392791.1 | |||||||||
| NM_001029257.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF316271 | |||||||
| TrEMBL | UniProtAcc | H2KZ06 | |||||||
| H2KZ07 | |||||||||
| Q7Z121 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ07 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2007 15:40:28 | WBPerson2970 | Name_change | CGC_name | clec-266 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (72) | |||||||||
| Strain | WBStrain00036366 | ||||||||
| WBStrain00051150 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022014 | ||||||||
| 00022015 | |||||||||
| 00022016 | |||||||||
| Ortholog (45) | |||||||||
| Paralog (24) | |||||||||
| Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info (4) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041161 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001487 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011147 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029183 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041162 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041164 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12639 | ||||||||
| Expr1019626 | |||||||||
| Expr1036874 | |||||||||
| Expr1145193 | |||||||||
| Expr2010158 | |||||||||
| Expr2028401 | |||||||||
| Drives_construct | WBCnstr00022346 | ||||||||
| WBCnstr00028333 | |||||||||
| Construct_product | WBCnstr00022346 | ||||||||
| WBCnstr00028333 | |||||||||
| Microarray_results | SMD_5C25B8.4 | ||||||||
| SMD_C25B8.4 | |||||||||
| 191626_s_at | |||||||||
| A_12_P102138 | |||||||||
| A_12_P118274 | |||||||||
| A_12_P151770 | |||||||||
| A_12_P151771 | |||||||||
| A_12_P151772 | |||||||||
| A_12_P151773 | |||||||||
| A_12_P151774 | |||||||||
| Aff_C25B8.4 | |||||||||
| GPL13394_WBGene00016088 | |||||||||
| GPL13914_C25B8.4 | |||||||||
| GPL14144_C25B8.4b_345-404_0.936_1_A | |||||||||
| GPL19516_CGZ0005861 | |||||||||
| GPL19516_CGZ0005862 | |||||||||
| GPL19516_CGZ0005863 | |||||||||
| GPL21109_C25B8.4a | |||||||||
| GPL21109_C25B8.4c | |||||||||
| GPL3518_CE27087 | |||||||||
| GPL8304_CE_WBGene00016088_A | |||||||||
| GPL8673_C25B8_4aP00014 | |||||||||
| GPL8673_C25B8_4aP00200 | |||||||||
| GPL8673_C25B8_4aP00496 | |||||||||
| GPL8673_C25B8_4bP00122 | |||||||||
| GPL8673_C25B8_4bP00308 | |||||||||
| GPL8673_C25B8_4bP00605 | |||||||||
| GPL8673_C25B8_4cP00014 | |||||||||
| GPL8673_C25B8_4cP00200 | |||||||||
| GPL8673_C25B8_4cP00284 | |||||||||
| GPL9450_C25B8.4 | |||||||||
| cea2.c.41829 | |||||||||
| Expression_cluster (351) | |||||||||
| Interaction (169) | |||||||||
| Map_info | Map | X | Position | -2.71813 | Error | 0.008827 | |||
| Positive | Positive_clone | C25B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
