WormBase Tree Display for Gene: WBGene00016088
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WBGene00016088 | SMap | S_parent | Sequence | C25B8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-266 | Person_evidence | WBPerson2531 | |||||
Sequence_name | C25B8.4 | ||||||||
Molecular_name | C25B8.4a | ||||||||
C25B8.4a.1 | |||||||||
CE27087 | |||||||||
C25B8.4b | |||||||||
CE34259 | |||||||||
C25B8.4c | |||||||||
CE34260 | |||||||||
C25B8.4b.1 | |||||||||
C25B8.4c.1 | |||||||||
Other_name | CELE_C25B8.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | clec-266 | ||||||||
DB_info | Database | AceView | gene | XH236 | |||||
WormQTL | gene | WBGene00016088 | |||||||
WormFlux | gene | WBGene00016088 | |||||||
NDB | locus_tag | CELE_C25B8.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016088|UniProtKB=H2KZ07 | |||||||
family | PTHR22802 | ||||||||
NCBI | gene | 180932 | |||||||
RefSeq | protein | NM_001029256.4 | |||||||
NM_001392791.1 | |||||||||
NM_001029257.5 | |||||||||
TREEFAM | TREEFAM_ID | TF316271 | |||||||
TrEMBL | UniProtAcc | H2KZ06 | |||||||
H2KZ07 | |||||||||
Q7Z121 | |||||||||
UniProt_GCRP | UniProtAcc | H2KZ07 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Oct 2007 15:40:28 | WBPerson2970 | Name_change | CGC_name | clec-266 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (72) | |||||||||
Strain | WBStrain00036366 | ||||||||
WBStrain00051150 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00022014 | ||||||||
00022015 | |||||||||
00022016 | |||||||||
Ortholog (45) | |||||||||
Paralog (24) | |||||||||
Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. Expressed in intestinal cell. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C25B8.4a | |||||||
C25B8.4b | |||||||||
C25B8.4c | |||||||||
Corresponding_transcript | C25B8.4a.1 | ||||||||
C25B8.4b.1 | |||||||||
C25B8.4c.1 | |||||||||
Other_sequence | GE625313.1 | ||||||||
CRC04609_1 | |||||||||
Oden_isotig22084 | |||||||||
CR07117 | |||||||||
GE626085.1 | |||||||||
CRC05725_1 | |||||||||
GE626570.1 | |||||||||
GE625727.1 | |||||||||
GE625068.1 | |||||||||
Associated_feature (20) | |||||||||
Experimental_info | RNAi_result | WBRNAi00041161 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001487 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011147 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029183 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041162 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041164 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (6) | |||||||||
Drives_construct | WBCnstr00022346 | ||||||||
WBCnstr00028333 | |||||||||
Construct_product | WBCnstr00022346 | ||||||||
WBCnstr00028333 | |||||||||
Microarray_results (32) | |||||||||
Expression_cluster (351) | |||||||||
Interaction (169) | |||||||||
Map_info | Map | X | Position | -2.71813 | Error | 0.008827 | |||
Positive | Positive_clone | C25B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031686 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |