WormBase Tree Display for Gene: WBGene00016064
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| WBGene00016064 | SMap | S_parent | Sequence | C24G7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acd-1 | Person_evidence | WBPerson2181 | |||||
| WBPerson145 | |||||||||
| Sequence_name | C24G7.2 | ||||||||
| Molecular_name | C24G7.2 | ||||||||
| C24G7.2.1 | |||||||||
| CE37320 | |||||||||
| Other_name | CELE_C24G7.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | acd-1 | ||||||||
| DB_info | Database | AceView | gene | 1E677 | |||||
| WormQTL | gene | WBGene00016064 | |||||||
| WormFlux | gene | WBGene00016064 | |||||||
| NDB | locus_tag | CELE_C24G7.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016064|UniProtKB=P91102 | |||||||
| family | PTHR11690 | ||||||||
| NCBI | gene | 182852 | |||||||
| RefSeq | protein | NM_058894.4 | |||||||
| TrEMBL | UniProtAcc | P91102 | |||||||
| UniProt_GCRP | UniProtAcc | P91102 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2009 11:39:18 | WBPerson2970 | Name_change | CGC_name | acd-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acd | ||||||||
| Allele (60) | |||||||||
| Strain | WBStrain00051569 | ||||||||
| WBStrain00051570 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (68) | |||||||||
| Paralog (30) | |||||||||
| Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Involved in response to acidic pH and sodium ion transport. Predicted to be located in membrane. Expressed in AMshL and AMshR. Is an ortholog of human ASIC4 (acid sensing ion channel subunit family member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24G7.2 | |||||||
| Corresponding_CDS_history | C24G7.2:wp130 | ||||||||
| Corresponding_transcript | C24G7.2.1 | ||||||||
| Associated_feature | WBsf217474 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00041107 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003001 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8358 | ||||||||
| Expr1028293 | |||||||||
| Expr1145142 | |||||||||
| Drives_construct | WBCnstr00013279 | ||||||||
| WBCnstr00028349 | |||||||||
| Construct_product | WBCnstr00013279 | ||||||||
| WBCnstr00028349 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (174) | |||||||||
| Interaction | WBInteraction000220289 | ||||||||
| WBInteraction000225813 | |||||||||
| WBInteraction000258514 | |||||||||
| WBInteraction000301357 | |||||||||
| WBInteraction000343766 | |||||||||
| WBInteraction000357677 | |||||||||
| WBInteraction000395372 | |||||||||
| WBInteraction000398809 | |||||||||
| WBInteraction000575309 | |||||||||
| Map_info | Map | I | Position | -1.72169 | Error | 0.001657 | |||
| Positive | Positive_clone | C24G7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (20) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
