WormBase Tree Display for Gene: WBGene00016053
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| WBGene00016053 | SMap | S_parent | Sequence | C24D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ptp-5.1 | |||||||
| Sequence_name | C24D10.1 | ||||||||
| Molecular_name | C24D10.1 | ||||||||
| C24D10.1.1 | |||||||||
| CE34705 | |||||||||
| Other_name | CELE_C24D10.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ptp-5.1 | ||||||||
| DB_info | Database | AceView | gene | 4F931 | |||||
| WormQTL | gene | WBGene00016053 | |||||||
| WormFlux | gene | WBGene00016053 | |||||||
| NDB | locus_tag | CELE_C24D10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016053|UniProtKB=O44136 | |||||||
| family | PTHR23219 | ||||||||
| NCBI | gene | 177291 | |||||||
| RefSeq | protein | NM_068332.6 | |||||||
| TREEFAM | TREEFAM_ID | TF321196 | |||||||
| TrEMBL | UniProtAcc | O44136 | |||||||
| UniProt_GCRP | UniProtAcc | O44136 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Nov 2018 16:28:49 | WBPerson1983 | Name_change | CGC_name | ptp-5.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ptp | ||||||||
| Allele | WBVar01473857 | ||||||||
| WBVar00909080 | |||||||||
| WBVar00909081 | |||||||||
| WBVar00909082 | |||||||||
| WBVar00909083 | |||||||||
| WBVar00909084 | |||||||||
| WBVar00909085 | |||||||||
| WBVar00909086 | |||||||||
| WBVar00909087 | |||||||||
| WBVar00909088 | |||||||||
| WBVar00909089 | |||||||||
| WBVar00909090 | |||||||||
| WBVar00909091 | |||||||||
| WBVar00909092 | |||||||||
| WBVar01499754 | |||||||||
| WBVar00909093 | |||||||||
| WBVar00909094 | |||||||||
| WBVar01499395 | |||||||||
| WBVar01499396 | |||||||||
| WBVar01649876 | |||||||||
| WBVar00188943 | |||||||||
| WBVar01499242 | |||||||||
| WBVar00572434 | |||||||||
| WBVar01499633 | |||||||||
| WBVar00424761 | |||||||||
| WBVar00424762 | |||||||||
| WBVar00424763 | |||||||||
| WBVar00424764 | |||||||||
| WBVar01569556 | |||||||||
| WBVar01569557 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032049 | ||||||||
| 00121734 | |||||||||
| 00121735 | |||||||||
| Ortholog (25) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. Located in nucleus. Expressed in head. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24D10.1 | |||||||
| Corresponding_CDS_history | C24D10.1:wp104 | ||||||||
| Corresponding_transcript | C24D10.1.1 | ||||||||
| Associated_feature | WBsf660137 | ||||||||
| WBsf660138 | |||||||||
| WBsf996450 | |||||||||
| WBsf1017345 | |||||||||
| WBsf228262 | |||||||||
| WBsf228263 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041084 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029141 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103199 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011103 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8731 | ||||||||
| Expr1024851 | |||||||||
| Expr1145120 | |||||||||
| Expr2001038 | |||||||||
| Expr2019256 | |||||||||
| Drives_construct | WBCnstr00007593 | ||||||||
| WBCnstr00013490 | |||||||||
| WBCnstr00028360 | |||||||||
| Construct_product | WBCnstr00007593 | ||||||||
| WBCnstr00013490 | |||||||||
| WBCnstr00028360 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction | WBInteraction000317047 | ||||||||
| WBInteraction000342267 | |||||||||
| WBInteraction000347074 | |||||||||
| WBInteraction000356942 | |||||||||
| WBInteraction000369734 | |||||||||
| WBInteraction000503085 | |||||||||
| WBInteraction000576501 | |||||||||
| Map_info | Map | IV | Position | 1.53805 | |||||
| Positive | Positive_clone | C24D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033469 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
