WormBase Tree Display for Gene: WBGene00016034

WBGene00016034 SMap: S_parent: Sequence: C24A3
  Identity: Version: 1
    Name: Sequence_name: C24A3.4
      Molecular_name: C24A3.4
        C24A3.4.1
        CE40019
      Other_name: CELE_C24A3.4 Accession_evidence: NDB BX284606
      Public_name: C24A3.4
    DB_info: Database: AceView gene XJ613
        WormQTL gene WBGene00016034
        WormFlux gene WBGene00016034
        NDB locus_tag CELE_C24A3.4
        NCBI gene 181140
        RefSeq protein NM_077116.5
        TREEFAM TREEFAM_ID TF314188
        TrEMBL UniProtAcc Q18122
        UniProt_GCRP UniProtAcc Q18122
        OMIM gene 604489
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (47)
    RNASeq_FPKM (74)
    GO_annotation: 00060250
      00060251
      00060252
      00060253
      00121721
    Contained_in_operon: CEOPX173
    Ortholog: WBGene00023664 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051068 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147419 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00128859 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098295 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g2804 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g8563 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19555 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3594 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g14728 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17908 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2934 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2935 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15021 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14368 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g18515 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23049 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00648.g13128 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g25186 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold601.g5416 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00034.g1880 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03499 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025078 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13549 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g6310 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g6311 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0182910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19672 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257450 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0032881 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050522-484 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:451 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1098273 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:3048 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00014128 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable alpha-methylacyl-CoA racemase activity. Predicted to be involved in bile acid metabolic process. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in several diseases, including alpha-methylacyl-CoA racemase deficiency; congenital bile acid synthesis defect 4; and urinary system cancer (multiple). Is an ortholog of human AMACR (alpha-methylacyl-CoA racemase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:4450 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:451)
      DOID:11054 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:451)
      DOID:8634 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:451)
      DOID:0111068 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:451)
      DOID:0060602 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:451)
      DOID:3459 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:451)
  Molecular_info: Corresponding_CDS: C24A3.4
    Corresponding_CDS_history: C24A3.4:wp156
    Corresponding_transcript: C24A3.4.1
    Other_sequence: JI174337.1
      Oden_isotig20794
      PPC13413_1
      Dviv_isotig15323
      HQ662605.1
      MIC05051_1
      MI05754
      JI180010.1
    Associated_feature: WBsf663071
      WBsf663072
      WBsf1006295
      WBsf1006296
      WBsf1023493
      WBsf236104
      WBsf236105
  Experimental_info: RNAi_result: WBRNAi00011077 Inferred_automatically: RNAi_primary
      WBRNAi00041053 Inferred_automatically: RNAi_primary
      WBRNAi00029130 Inferred_automatically: RNAi_primary
      WBRNAi00092596 Inferred_automatically: RNAi_primary
      WBRNAi00011078 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023350
      Expr1145091
      Expr2001032
      Expr2019250
    Drives_construct: WBCnstr00028373
    Construct_product: WBCnstr00028373
    Microarray_results (28)
    Expression_cluster (89)
    Interaction: WBInteraction000178656
      WBInteraction000333545
  Map_info: Positive: Positive_clone: C24A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 0.488421
  Reference: WBPaper00038491
    WBPaper00042257
    WBPaper00055090
    WBPaper00062625
    WBPaper00064552
  Method: Gene