WormBase Tree Display for Gene: WBGene00015947
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| WBGene00015947 | SMap | S_parent | Sequence | C18A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C18A11.1 | |||||||
| Molecular_name | C18A11.1 | ||||||||
| C18A11.1.1 | |||||||||
| CE04032 | |||||||||
| Other_name | CELE_C18A11.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C18A11.1 | ||||||||
| DB_info | Database | AceView | gene | XI687 | |||||
| WormQTL | gene | WBGene00015947 | |||||||
| WormFlux | gene | WBGene00015947 | |||||||
| NDB | locus_tag | CELE_C18A11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015947|UniProtKB=Q18070 | |||||||
| family | PTHR35373 | ||||||||
| NCBI | gene | 182759 | |||||||
| RefSeq | protein | NM_076957.9 | |||||||
| TREEFAM | TREEFAM_ID | TF317480 | |||||||
| TrEMBL | UniProtAcc | Q18070 | |||||||
| UniProt_GCRP | UniProtAcc | Q18070 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01927515 | ||||||||
| WBVar00236531 | |||||||||
| WBVar01884610 | |||||||||
| WBVar01499933 | |||||||||
| WBVar01165081 | |||||||||
| WBVar01165082 | |||||||||
| WBVar01165083 | |||||||||
| WBVar01165084 | |||||||||
| WBVar01165085 | |||||||||
| WBVar01165086 | |||||||||
| WBVar01165087 | |||||||||
| WBVar01165088 | |||||||||
| WBVar02139663 | |||||||||
| WBVar01499781 | |||||||||
| WBVar01487286 | |||||||||
| WBVar00509904 | |||||||||
| WBVar00509905 | |||||||||
| WBVar00509906 | |||||||||
| WBVar00509907 | |||||||||
| WBVar00509908 | |||||||||
| WBVar02046594 | |||||||||
| WBVar02046595 | |||||||||
| WBVar00146307 | |||||||||
| WBVar01499642 | |||||||||
| WBVar01500012 | |||||||||
| WBVar01500013 | |||||||||
| WBVar01820400 | |||||||||
| WBVar01820401 | |||||||||
| WBVar02064990 | |||||||||
| WBVar01816158 | |||||||||
| WBVar01491411 | |||||||||
| WBVar01498960 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00011137 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020759 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019143 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including amphid sheath cell; coelomocyte; dopaminergic neurons; head mesodermal cell; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-three chemicals including 1-methylnicotinamide; methylmercuric chloride; and bisphenol A based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed (2) | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C18A11.1 | |||||||
| Corresponding_transcript | C18A11.1.1 | ||||||||
| Other_sequence | CBC06019_1 | ||||||||
| Associated_feature | WBsf648346 | ||||||||
| WBsf979010 | |||||||||
| WBsf1006043 | |||||||||
| WBsf1006044 | |||||||||
| WBsf1023359 | |||||||||
| WBsf236014 | |||||||||
| WBsf236015 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040872 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076148 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026358 | ||||||||
| Expr1144918 | |||||||||
| Expr2000947 | |||||||||
| Expr2019168 | |||||||||
| Drives_construct | WBCnstr00028434 | ||||||||
| Construct_product | WBCnstr00028434 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (298) | |||||||||
| Interaction (126) | |||||||||
| Map_info | Positive | Positive_clone | C18A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.614518 | |||||||
| Reference | WBPaper00064370 | ||||||||
| Method | Gene |
