WormBase Tree Display for Gene: WBGene00015936
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WBGene00015936 | SMap | S_parent | Sequence | C17H12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C17H12.11 | |||||||
Molecular_name | C17H12.11 | ||||||||
C17H12.11.1 | |||||||||
CE49417 | |||||||||
C17H12.11.2 | |||||||||
Other_name | CELE_C17H12.11 | Accession_evidence | NDB | BX284604 | |||||
Public_name | C17H12.11 | ||||||||
DB_info | Database | AceView | gene | 4H571 | |||||
WormQTL | gene | WBGene00015936 | |||||||
WormFlux | gene | WBGene00015936 | |||||||
NDB | locus_tag | CELE_C17H12.11 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00015936|UniProtKB=O45082 | |||||||
family | PTHR21749 | ||||||||
NCBI | gene | 182757 | |||||||
RefSeq | protein | NM_001383112.2 | |||||||
TREEFAM | TREEFAM_ID | TF318497 | |||||||
TrEMBL | UniProtAcc | O45082 | |||||||
UniProt_GCRP | UniProtAcc | O45082 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (34) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog | WBGene00004113 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00009408 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00013702 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00013704 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00236786 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in RIR; hypodermis; and muscle cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eleven chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C17H12.11 | |||||||
Corresponding_CDS_history | C17H12.11:wp240 | ||||||||
Corresponding_transcript | C17H12.11.1 | ||||||||
C17H12.11.2 | |||||||||
Associated_feature | WBsf996839 | ||||||||
WBsf1017626 | |||||||||
WBsf228461 | |||||||||
WBsf228462 | |||||||||
Experimental_info | RNAi_result | WBRNAi00010942 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040861 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram2017 | ||||||||
Expr5293 | |||||||||
Expr1021998 | |||||||||
Expr1144907 | |||||||||
Expr2000938 | |||||||||
Expr2019159 | |||||||||
Microarray_results (12) | |||||||||
Expression_cluster (120) | |||||||||
Interaction (125) | |||||||||
Map_info | Positive | Positive_clone | C17H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 3.23635 | |||||||
Method | Gene |