WormBase Tree Display for Gene: WBGene00015920
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| WBGene00015920 | SMap | S_parent | Sequence | F59E12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eif-3.L | Paper_evidence | WBPaper00050195 | |||||
| Person_evidence | WBPerson26429 | ||||||||
| Sequence_name | C17G10.9 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_C17G10.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | eif-3.L | ||||||||
| DB_info | Database | AceView | gene | 2F906 | |||||
| WormQTL | gene | WBGene00015920 | |||||||
| NDB | locus_tag | CELE_C17G10.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015920|UniProtKB=Q95QW0 | |||||||
| family | PTHR13242 | ||||||||
| NCBI | gene | 24104220 | |||||||
| RefSeq | protein | NM_001381425.2 | |||||||
| NM_001381424.1 | |||||||||
| NM_001306574.2 | |||||||||
| NM_001348631.4 | |||||||||
| NM_001306575.4 | |||||||||
| SwissProt | UniProtAcc | Q95QW0 | |||||||
| TREEFAM | TREEFAM_ID | TF101523 | |||||||
| TrEMBL | UniProtAcc | A0A1N7SYP7 | |||||||
| A0A1N7SYR1 | |||||||||
| A0A1N7SYP6 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95QW0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Nov 2016 11:06:21 | WBPerson2970 | Name_change | CGC_name | eif-3.L | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eif | ||||||||
| Allele (28) | |||||||||
| Strain | WBStrain00001212 | ||||||||
| WBStrain00040819 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP2196 | ||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00015407 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Expressed in head and tail. Is an ortholog of human EIF3L (eukaryotic translation initiation factor 3 subunit L). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17G10.9a | |||||||
| C17G10.9b | |||||||||
| C17G10.9c | |||||||||
| C17G10.9d | |||||||||
| C17G10.9e | |||||||||
| Corresponding_CDS_history | C17G10.9d:wp107 | ||||||||
| Corresponding_transcript | C17G10.9a.1 | ||||||||
| C17G10.9b.1 | |||||||||
| C17G10.9c.1 | |||||||||
| C17G10.9d.1 | |||||||||
| C17G10.9e.1 | |||||||||
| Other_sequence (122) | |||||||||
| Associated_feature | WBsf665540 | ||||||||
| WBsf223069 | |||||||||
| WBsf223070 | |||||||||
| WBsf223071 | |||||||||
| WBsf223072 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010934 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040842 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016128 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000531 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1661 | ||||||||
| Expr5291 | |||||||||
| Expr1023225 | |||||||||
| Expr1036806 | |||||||||
| Expr1144888 | |||||||||
| Expr2011262 | |||||||||
| Expr2029498 | |||||||||
| Drives_construct | WBCnstr00002105 | ||||||||
| WBCnstr00028454 | |||||||||
| Construct_product | WBCnstr00028454 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | II | Position | -1.02032 | |||||
| Positive | Positive_clone | C17G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00050195 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
