WormBase Tree Display for Gene: WBGene00015890
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| WBGene00015890 | SMap | S_parent | Sequence | C17C3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C17C3.5 | |||||||
| Molecular_name | C17C3.5 | ||||||||
| C17C3.5.1 | |||||||||
| CE04025 | |||||||||
| Other_name | CELE_C17C3.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C17C3.5 | ||||||||
| DB_info | Database | AceView | gene | 2F843 | |||||
| WormQTL | gene | WBGene00015890 | |||||||
| WormFlux | gene | WBGene00015890 | |||||||
| NDB | locus_tag | CELE_C17C3.5 | |||||||
| NCBI | gene | 182715 | |||||||
| RefSeq | protein | NM_062669.4 | |||||||
| TrEMBL | UniProtAcc | Q18059 | |||||||
| UniProt_GCRP | UniProtAcc | Q18059 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (12) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00023954 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00033413 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00035626 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00037960 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00041155 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00041890 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| chrII_pilon.g4539 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00013616 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00013619 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapapapa; ABalapppaa; ABalapppapa; ABplpaaappa; and ABprpaaappa based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by seventeen chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17C3.5 | |||||||
| Corresponding_transcript | C17C3.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00028994 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040783 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008412 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019238 | ||||||||
| Expr1144822 | |||||||||
| Expr2000898 | |||||||||
| Expr2019118 | |||||||||
| Drives_construct | WBCnstr00028480 | ||||||||
| Construct_product | WBCnstr00028480 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (98) | |||||||||
| Map_info | Positive | Positive_clone | C17C3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -1.15094 | |||||||
| Method | Gene |
