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WormBase Tree Display for Gene: WBGene00015860

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Name Class

WBGene00015860SMapS_parentSequenceC16D9
IdentityVersion1
NameSequence_nameC16D9.5
Molecular_nameC16D9.5
C16D9.5.1
CE35239
C16D9.5.2
Other_nameCELE_C16D9.5Accession_evidenceNDBBX284605
Public_nameC16D9.5
DB_infoDatabaseAceViewgene5I722
WormQTLgeneWBGene00015860
WormFluxgeneWBGene00015860
NDBlocus_tagCELE_C16D9.5
PanthergeneCAEEL|WormBase=WBGene00015860|UniProtKB=Q22899
familyPTHR31389
NCBIgene182686
RefSeqproteinNM_072724.3
TREEFAMTREEFAM_IDTF320732
TrEMBLUniProtAccQ22899
UniProt_GCRPUniProtAccQ22899
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:56WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKM (74)
Ortholog (67)
Paralog (15)
Structured_descriptionAutomated_descriptionEnriched in ABplpppaapa; ABprpppaapa; g1; neurons; and in male based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; eat-2; and rde-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including stavudine; Zidovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1647); Phosphorylation site; and Protein of unknown function DUF1647.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC16D9.5
Corresponding_CDS_historyC16D9.5:wp106
Corresponding_transcriptC16D9.5.1
C16D9.5.2
Other_sequenceCJC15655_1
CJC09972_1
Associated_featureWBsf234054
WBsf234055
Experimental_infoRNAi_resultWBRNAi00010868Inferred_automaticallyRNAi_primary
WBRNAi00028975Inferred_automaticallyRNAi_primary
WBRNAi00040735Inferred_automaticallyRNAi_primary
Expr_patternExpr1018139
Expr1144780
Expr2000880
Expr2019099
Drives_constructWBCnstr00028507
Construct_productWBCnstr00028507
Microarray_results (20)
Expression_cluster (146)
InteractionWBInteraction000449632
Map_infoPositivePositive_cloneC16D9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV1.25092
ReferenceWBPaper00065080
MethodGene