WormBase Tree Display for Gene: WBGene00015829
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WBGene00015829 | SMap | S_parent | Sequence | C16C4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name (5) | |||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | math | ||||||
Allele (63) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (18) | |||||||
Paralog (85) | |||||||
Structured_description | Automated_description | Enriched in NSM; intestine; mechanosensory neurons; and nerve ring neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including aldicarb; multi-walled carbon nanotube; and metformin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C16C4.5 | |||||
Corresponding_CDS_history | C16C4.5:wp152 | ||||||
Corresponding_transcript | C16C4.5.1 | ||||||
Associated_feature | WBsf986843 | ||||||
WBsf220888 | |||||||
WBsf220889 | |||||||
Experimental_info | RNAi_result | WBRNAi00010843 | Inferred_automatically | RNAi_primary | |||
WBRNAi00040706 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1020105 | ||||||
Expr1144748 | |||||||
Expr2013393 | |||||||
Expr2031627 | |||||||
Drives_construct | WBCnstr00028535 | ||||||
Construct_product | WBCnstr00028535 | ||||||
Microarray_results (12) | |||||||
Expression_cluster (184) | |||||||
Map_info | Map | II | Position | -14.2787 | Error | 0.002939 | |
Positive | Positive_clone | C16C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |