WormBase Tree Display for Gene: WBGene00015814
expand all nodes | collapse all nodes | view schema
| WBGene00015814 | SMap | S_parent | Sequence | C16A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | oatr-1 | Paper_evidence | WBPaper00040135 | |||||
| Sequence_name | C16A3.10 | ||||||||
| Molecular_name | C16A3.10 | ||||||||
| C16A3.10.1 | |||||||||
| CE04010 | |||||||||
| C16A3.10.2 | |||||||||
| Other_name | orn-1 | Paper_evidence | WBPaper00040135 | ||||||
| CELE_C16A3.10 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | oatr-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Aug 2016 14:35:06 | WBPerson2970 | Name_change | CGC_name | oatr-1 | ||||
| Status | Live | ||||||||
| Gene_info (9) | |||||||||
| Disease_info | Experimental_model | DOID:9252 | Homo sapiens | Paper_evidence | WBPaper00040135 | ||||
| WBPaper00059575 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 13 Mar 2023 00:00:00 | ||||||||
| Potential_model | DOID:1415 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8091) | |||||
| Disease_relevance | C16A3.10 encodes an ornithine transaminase orthologous to the human gene OAT (ornithine aminotransferase) which when mutated leads to ornithinemia and gyrate atrophy. | Homo sapiens | Accession_evidence | OMIM | 258870 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 30 Aug 2011 00:00:00 | ||||||||
| Models_disease_in_annotation | WBDOannot00000008 | ||||||||
| Models_disease_asserted | WBDOannot00001378 | ||||||||
| Molecular_info | Corresponding_CDS | C16A3.10 | |||||||
| Corresponding_CDS_history | C16A3.10b:wp255 | ||||||||
| C16A3.10c:wp255 | |||||||||
| Corresponding_transcript | C16A3.10.1 | ||||||||
| C16A3.10.2 | |||||||||
| Other_sequence (83) | |||||||||
| Associated_feature | WBsf651120 | ||||||||
| WBsf666987 | |||||||||
| WBsf992744 | |||||||||
| WBsf992745 | |||||||||
| WBsf992746 | |||||||||
| WBsf992747 | |||||||||
| WBsf1015085 | |||||||||
| WBsf1015086 | |||||||||
| WBsf1015087 | |||||||||
| WBsf226809 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00110479 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00110480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010816 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110478 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028943 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00110481 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040651 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005376 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00090612 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1413 | ||||||||
| Chronogram2045 | |||||||||
| Expr5273 | |||||||||
| Expr5274 | |||||||||
| Expr5275 | |||||||||
| Expr1021415 | |||||||||
| Expr1036771 | |||||||||
| Expr1144706 | |||||||||
| Expr2014589 | |||||||||
| Expr2032822 | |||||||||
| Drives_construct | WBCnstr00002202 | ||||||||
| WBCnstr00002203 | |||||||||
| WBCnstr00004174 | |||||||||
| WBCnstr00004252 | |||||||||
| WBCnstr00028545 | |||||||||
| Construct_product | WBCnstr00028545 | ||||||||
| Regulate_expr_cluster | WBPaper00040135:orn-1(RNAi)_downregulated | ||||||||
| WBPaper00040135:orn-1(RNAi)_upregulated | |||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (177) | |||||||||
| Interaction (94) | |||||||||
| Map_info | Map | III | Position | -1.30449 | |||||
| Positive | Positive_clone | C16A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00040135 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059575 | |||||||||
| WBPaper00061536 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
