WormBase Tree Display for Gene: WBGene00015790

WBGene00015790 SMap: S_parent: Sequence: C15C7
  Identity: Version: 1
    Name: Sequence_name: C15C7.4
      Molecular_name: C15C7.4
        C15C7.4.1
        CE52554
        C15C7.4.2
      Other_name: CELE_C15C7.4 Accession_evidence: NDB BX284606
      Public_name: C15C7.4
    DB_info: Database: AceView gene XD765
        WormQTL gene WBGene00015790
        WormFlux gene WBGene00015790
        NDB locus_tag CELE_C15C7.4
        NCBI gene 182633
        RefSeq protein NM_001361791.5
        TrEMBL UniProtAcc Q18010
        UniProt_GCRP UniProtAcc Q18010
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar00498396
      WBVar00498397
      WBVar00498398
      WBVar00498399
      WBVar00498400
      WBVar01499195
      WBVar01601330
      WBVar01131746
      WBVar01131747
      WBVar01131748
      WBVar01131749
      WBVar01131750
      WBVar01131751
      WBVar01131752
      WBVar01131753
      WBVar01131754
      WBVar01131755
      WBVar01131756
      WBVar01131757
      WBVar01131758
      WBVar01131759
      WBVar01131760
      WBVar01131761
      WBVar01131762
      WBVar02138973
      WBVar01499636
      WBVar01822412
      WBVar01549433
      WBVar00303710
      WBVar00076916
      WBVar00076917
      WBVar00498393
      WBVar00498394
      WBVar00498395
    RNASeq_FPKM (74)
    Ortholog (15)
    Structured_description: Automated_description: Enriched in neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray; RNA-seq; and proteomic studies. Is affected by ten chemicals including aldicarb; multi-walled carbon nanotube; and Sodium Chloride based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C15C7.4
    Corresponding_CDS_history: C15C7.4:wp263
    Corresponding_transcript: C15C7.4.1
      C15C7.4.2
    Associated_feature: WBsf1004528
      WBsf1004529
      WBsf1004530
      WBsf1022571
      WBsf235452
      WBsf235453
      WBsf235454
  Experimental_info: RNAi_result: WBRNAi00040597 Inferred_automatically: RNAi_primary
      WBRNAi00028912 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011686
      Expr1036756
      Expr1144651
      Expr2000812
      Expr2019030
    Drives_construct: WBCnstr00028566
    Construct_product: WBCnstr00028566
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032425:up_in_zfp-1
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:A-class-motor-neurons_larva_SelectivelyEnriched
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:all-neurons_larva_SelectivelyEnriched
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00038061:aldicarb_upregulated
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045417:19Q-huntingtin_downreglated
      WBPaper00045417:128Q-huntingtin_upreglated
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00047131:daf-2(e1370)_upregulated_N2-background
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00053615:SMO-1_target
      WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
      WBPaper00053810:clk-1(qm30)_downregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055482:Tunicamycin_downregulated
      WBPaper00055648:male-CEM-neurons_expressed
      WBPaper00055648:male-tail_expressed
      WBPaper00055648:nerve-ring_expressed
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_OP50
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059754:C.neoformans_H99_upregulated
      WBPaper00059754:P.aeruginosa_PA14_upregulated
      WBPaper00059763:neuron_acr-2(n2420gf)_regulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060871:M.humicola-extract_1h_regulated
      WBPaper00060871:M.humicola-extract_4h_regulated
      WBPaper00060871:M.humicola-infection_12h_regulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:rgs-2_11061-pde-1
      WBPaper00061651:ADF_enriched
      WBPaper00061651:ADL_enriched
      WBPaper00061651:AIM_enriched
      WBPaper00061651:ASG_enriched
      WBPaper00061651:ASJ_enriched
      WBPaper00061651:AWA_enriched
      WBPaper00061651:BAG_enriched
      WBPaper00061651:BDU_enriched
      WBPaper00061651:PVR_enriched
      WBPaper00061753:csr-1(tor159)_downregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_RMG
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062095:unc-4(e120)_upregulated_VA-neuron
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062520:qui-1(db104)_upregulated
      WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064156:lipl-4(overexpress)_upregulated
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064532:pals-22(jy3)_upregulated
      WBPaper00064532:pals-25(icb98)_upregulated
      WBPaper00064532:pals-25(jy111)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064721:fasn-1(g14)_downregulated_starved
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065623:119
      WBPaper00065835:Day5_vs_Day1_downregulated
      WBPaper00065841:35_2
      WBPaper00065841:35_3
      WBPaper00065841:71_0
      WBPaper00065841:80_0
      WBPaper00065841:81_0
      WBPaper00065841:84_0
      WBPaper00065841:85_0
      WBPaper00065841:92_0
      WBPaper00065841:106_0
      WBPaper00065841:137_0
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00065995:M.humicola-extract_downregulated_N2
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_14
      WBPaper00036286:Pattern_I
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
    Interaction: WBInteraction000281625
      WBInteraction000294626
      WBInteraction000397893
      WBInteraction000428697
      WBInteraction000552088
      WBInteraction000573816
      WBInteraction000574373
  Map_info: Positive: Positive_clone: C15C7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -12.0029
  Reference: WBPaper00018596
  Method: Gene