WormBase Tree Display for Gene: WBGene00015660
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WBGene00015660 | SMap | S_parent | Sequence | C09H5 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | catp | ||||||
Allele (52) | |||||||
Strain | WBStrain00032113 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Ortholog (45) | |||||||
Paralog (14) | |||||||
Structured_description | Automated_description | Predicted to enable P-type sodium:potassium-exchanging transporter activity. Acts upstream of or within IRE1-mediated unfolded protein response. Predicted to be located in plasma membrane. Is an ortholog of human ATP12A (ATPase H+/K+ transporting non-gastric alpha2 subunit) and ATP4A (ATPase H+/K+ transporting subunit alpha). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:819) | ||
Molecular_info | Corresponding_CDS | C09H5.2a | |||||
Corresponding_CDS_history | C09H5.2b:wp252 | ||||||
Corresponding_transcript | C09H5.2b | ||||||
C09H5.2a.1 | |||||||
Other_sequence (12) | |||||||
Associated_feature | WBsf646985 | ||||||
WBsf232059 | |||||||
WBsf232060 | |||||||
Experimental_info | RNAi_result | WBRNAi00028756 | Inferred_automatically | RNAi_primary | |||
WBRNAi00001019 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095220 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00010565 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040263 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1025356 | ||||||
Expr1036706 | |||||||
Expr1144332 | |||||||
Expr2009730 | |||||||
Expr2027970 | |||||||
Drives_construct | WBCnstr00028678 | ||||||
Construct_product | WBCnstr00028678 | ||||||
Microarray_results (26) | |||||||
Expression_cluster (361) | |||||||
Interaction | WBInteraction000250542 | ||||||
WBInteraction000331263 | |||||||
WBInteraction000519408 | |||||||
WBInteraction000539560 | |||||||
WBInteraction000570763 | |||||||
WBInteraction000580920 | |||||||
Map_info | Map | V | Position | 1.00792 | Error | 0.000219 | |
Positive | Positive_clone | C09H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00028789 | ||||||
WBPaper00032454 | |||||||
WBPaper00035429 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00059550 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |