WormBase Tree Display for Gene: WBGene00015609

WBGene00015609 SMap: S_parent: Sequence: C08F1
  Identity: Version: 2
    Name: CGC_name: math-4 Person_evidence: WBPerson655
      Sequence_name: C08F1.5
      Molecular_name: C08F1.5
        C08F1.5.1
        CE46867
      Other_name: CELE_C08F1.5 Accession_evidence: NDB BX284602
      Public_name: math-4
    DB_info: Database: WormQTL gene WBGene00015609
        SignaLink protein WBGene00015609
        WormFlux gene WBGene00015609
        NDB locus_tag CELE_C08F1.5
        Panther gene CAEEL|WormBase=WBGene00015609|UniProtKB=Q2V074
          family PTHR46308
        NCBI gene 173548
        RefSeq protein NM_001047270.4
        TrEMBL UniProtAcc H2KYK6
        UniProt_GCRP UniProtAcc H2KYK6
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 17:54:47 WBPerson2970 Name_change: CGC_name: math-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: math
    Allele: WBVar01499702
      WBVar02120604
      WBVar02123182
      WBVar00357828
      WBVar00357829
      WBVar02101835
      WBVar00357830
      WBVar02101836
      WBVar00357831
      WBVar00357832
      WBVar00357833
      WBVar02121716
      WBVar00357834
      WBVar00357835
      WBVar02123007
      WBVar00357836
      WBVar00357837
      WBVar02121537
      WBVar00357838
      WBVar00357839
      WBVar00357840
      WBVar00357841
      WBVar01898312
      WBVar02122097
      WBVar02099095
      WBVar02099096
      WBVar02099097
      WBVar02119900
      WBVar01500106
      WBVar01624562
      WBVar01624563
      WBVar01624564
      WBVar02124326
      WBVar00041931
      WBVar00041936
      WBVar02121946
      WBVar00041941
      WBVar00041946
      WBVar02102810
      WBVar01891447
      WBVar00041951
      WBVar00041956
      WBVar00041961
      WBVar00041966
      WBVar00041971
      WBVar01498306
      WBVar02124543
      WBVar00041976
      WBVar00041981
      WBVar02122524
      WBVar00041986
      WBVar00041991
      WBVar00041996
      WBVar00042001
      WBVar00042006
      WBVar02017537
      WBVar00042011
      WBVar00707645
      WBVar00707646
      WBVar00707647
      WBVar00042016
      WBVar00707648
      WBVar00707649
      WBVar00042021
      WBVar00707650
      WBVar00707651
      WBVar00707652
      WBVar00707653
      WBVar00042026
      WBVar00707654
      WBVar00707655
      WBVar00042031
      WBVar00707656
      WBVar00707657
      WBVar00042036
      WBVar00707658
      WBVar00091181
      WBVar00707659
      WBVar01908184
      WBVar00707660
      WBVar01534708
      WBVar02084277
      WBVar00707661
      WBVar00042041
      WBVar02084278
      WBVar01534709
      WBVar02084279
      WBVar00707662
      WBVar01534710
      WBVar02084280
      WBVar01534711
      WBVar00707663
      WBVar00042046
      WBVar02084281
      WBVar01534712
      WBVar00707664
      WBVar02084282
      WBVar01534713
      WBVar00707665
      WBVar02084283
      WBVar01534714
      WBVar00707666
      WBVar01546211
      WBVar00707667
      WBVar01534715
      WBVar02084284
      WBVar01546212
      WBVar00707668
      WBVar01546213
      WBVar01534716
      WBVar02084285
      WBVar01534717
      WBVar00707669
      WBVar01546214
      WBVar02084286
      WBVar01534718
      WBVar00042056
      WBVar01546215
      WBVar02084287
      WBVar00707670
      WBVar01546216
      WBVar00707671
      WBVar01534719
      WBVar00707672
      WBVar01546217
      WBVar01534720
      WBVar00707673
      WBVar01546218
      WBVar00042061
      WBVar01534721
      WBVar00707674
      WBVar01534722
      WBVar00707675
      WBVar01534723
      WBVar00042066
      WBVar01534724
      WBVar01705108
      WBVar00707676
      WBVar01534725
      WBVar01705109
      WBVar00707677
      WBVar01534726
      WBVar01705110
      WBVar01499649
      WBVar01534727
      WBVar01534728
      WBVar01665443
      WBVar01534729
      WBVar01717285
      WBVar01534730
      WBVar01717286
      WBVar01665444
      WBVar00042076
      WBVar01717287
      WBVar01534731
      WBVar01717288
      WBVar01534732
      WBVar01717289
      WBVar00042081
      WBVar01534733
      WBVar01717290
      WBVar01534734
      WBVar01534735
      WBVar00233531
      WBVar01717291
      WBVar01717292
      WBVar01534736
      WBVar00233532
      WBVar00042086
      WBVar01534737
      WBVar01717293
      WBVar01534738
      WBVar00233534
      WBVar01717294
      WBVar01534739
      WBVar01717295
      WBVar00042091
      WBVar01534740
      WBVar01717296
      WBVar01534741
      WBVar01717297
      WBVar01822978
      WBVar01534742
      WBVar01717298
      WBVar02122773
      WBVar01717299
      WBVar01534743
      WBVar01534744
      WBVar01717300
      WBVar01717301
      WBVar01534745
      WBVar01534746
      WBVar01717302
      WBVar01683160
      WBVar01534747
      WBVar01717303
      WBVar01683161
      WBVar01717304
      WBVar01534748
      WBVar01717305
      WBVar01534749
      WBVar01683162
      WBVar02121124
      WBVar01717306
      WBVar01683163
      WBVar01534750
      WBVar01717307
      WBVar01534751
      WBVar01683164
      WBVar01717308
      WBVar01534752
      WBVar01683165
      WBVar01717309
      WBVar01534753
      WBVar01683166
      WBVar01534754
      WBVar01717310
      WBVar01683167
      WBVar01683168
      WBVar01534755
      WBVar01717311
      WBVar01933625
      WBVar01683169
      WBVar01717312
      WBVar01534756
      WBVar01933626
      WBVar01717313
      WBVar01534757
      WBVar01683170
      WBVar01933627
      WBVar01933628
      WBVar01534758
      WBVar01717314
      WBVar01683171
      WBVar01683172
      WBVar01534759
      WBVar01683173
      WBVar01683174
      WBVar01683175
      WBVar01683176
      WBVar00091057
      WBVar00098519
      WBVar02124456
      WBVar02122433
      WBVar02120776
      WBVar00098520
      WBVar00098521
      WBVar01641519
      WBVar00098522
      WBVar00098523
    RNASeq_FPKM (74)
    Ortholog: WBGene00154588 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00143314 Caenorhabditis brenneri From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19300 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold630.g19304 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      chrII_pilon.g3473 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (85)
    Structured_description: Automated_description: Enriched in body wall muscle cell from MS lineage; head mesodermal cell; intestine; and rectal muscle based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by twelve chemicals including hydrogen sulfide; Zidovudine; and Psoralens based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C08F1.5
    Corresponding_CDS_history: C08F1.5:wp84
      C08F1.5:wp149
      C08F1.5:wp152
      C08F1.5a:wp229
      C08F1.5b:wp229
      C08F1.5b:wp274
    Corresponding_transcript: C08F1.5.1
    Associated_feature: WBsf649892
      WBsf649893
      WBsf665366
      WBsf986811
      WBsf986812
      WBsf1011628
      WBsf1011629
      WBsf1011630
      WBsf222721
  Experimental_info: RNAi_result: WBRNAi00010461 Inferred_automatically: RNAi_primary
      WBRNAi00066641 Inferred_automatically: RNAi_primary
      WBRNAi00040108 Inferred_automatically: RNAi_primary
      WBRNAi00000751 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019259
      Expr1036681
      Expr1144182
      Expr2013421
      Expr2031655
    Drives_construct: WBCnstr00028715
    Construct_product: WBCnstr00028715
    Microarray_results (17)
    Expression_cluster (149)
    Interaction (16)
  Map_info: Map: II Position: -14.4278 Error: 0.005017
    Positive: Positive_clone: C08F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene