WormBase Tree Display for Gene: WBGene00015588
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| WBGene00015588 | SMap | S_parent | Sequence | C08A9 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | lido-3 | ||||||||
| Sequence_name | C08A9.8 | |||||||||
| Molecular_name | C08A9.8 | |||||||||
| Other_name | CELE_C08A9.8 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | lido-3 | |||||||||
| DB_info | Database | AceView | gene | XR716 | ||||||
| WormQTL | gene | WBGene00015588 | ||||||||
| WormFlux | gene | WBGene00015588 | ||||||||
| NDB | locus_tag | CELE_C08A9.8 | ||||||||
| NCBI | gene | 182386 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Nov 2018 16:28:50 | WBPerson1983 | Name_change | CGC_name | lido-3 | |||||
| 3 | 14 Nov 2018 11:10:11 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | lido | |||||||||
| Allele (37) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00025680 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00151171 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00157584 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00054089 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00054582 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00215586 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00211131 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00212450 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| WBGene00209024 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||||
| Paralog (17) | ||||||||||
| Structured_description | Automated_description | Enriched in ABalaapppa and ABalapaapa based on single-cell RNA-seq studies. Is affected by several genes including sir-2.1; csr-1; and pqm-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C08A9.8:wp268 | ||||||||
| Corresponding_pseudogene | C08A9.8 | |||||||||
| Associated_feature | WBsf654725 | |||||||||
| WBsf655624 | ||||||||||
| WBsf1008800 | ||||||||||
| WBsf1024955 | ||||||||||
| Experimental_info | Expr_pattern | Expr1144122 | ||||||||
| Expr2000591 | ||||||||||
| Expr2018817 | ||||||||||
| Drives_construct | WBCnstr00028729 | |||||||||
| Construct_product | WBCnstr00028729 | |||||||||
| Microarray_results (12) | ||||||||||
| Expression_cluster (72) | ||||||||||
| Map_info | Positive | Positive_clone | C08A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | X | 24.076 | ||||||||
| Method | Gene |
