WormBase Tree Display for Gene: WBGene00015504
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| WBGene00015504 | SMap | S_parent | Sequence | C06A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | simr-1 | Person_evidence | WBPerson2733 | |||||
| Sequence_name | C06A5.6 | ||||||||
| Molecular_name | C06A5.6 | ||||||||
| C06A5.6.1 | |||||||||
| CE07953 | |||||||||
| C06A5.6.2 | |||||||||
| C06A5.6.3 | |||||||||
| Other_name | CELE_C06A5.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | simr-1 | ||||||||
| DB_info | Database | AceView | gene | 1G560 | |||||
| WormQTL | gene | WBGene00015504 | |||||||
| WormFlux | gene | WBGene00015504 | |||||||
| NDB | locus_tag | CELE_C06A5.6 | |||||||
| NCBI | gene | 172273 | |||||||
| RefSeq | protein | NM_001380434.2 | |||||||
| SwissProt | UniProtAcc | O01477 | |||||||
| TREEFAM | TREEFAM_ID | TF350424 | |||||||
| UniProt_GCRP | UniProtAcc | O01477 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Oct 2019 15:58:06 | WBPerson1983 | Name_change | CGC_name | simr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | simr | ||||||||
| Allele (45) | |||||||||
| Possibly_affected_by | WBVar02153171 | ||||||||
| WBVar02153520 | |||||||||
| Strain | WBStrain00048291 | ||||||||
| WBStrain00048292 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024698 | ||||||||
| 00024699 | |||||||||
| 00024700 | |||||||||
| 00024701 | |||||||||
| 00024702 | |||||||||
| 00024703 | |||||||||
| 00024704 | |||||||||
| 00024705 | |||||||||
| Ortholog (22) | |||||||||
| Paralog | WBGene00014113 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Involved in multicellular organismal reproductive process; positive regulation of oogenesis; and siRNA processing. Located in perinuclear region of cytoplasm. Expressed in germ cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06A5.6 | |||||||
| Corresponding_transcript | C06A5.6.1 | ||||||||
| C06A5.6.2 | |||||||||
| C06A5.6.3 | |||||||||
| Associated_feature | WBsf649203 | ||||||||
| WBsf983810 | |||||||||
| WBsf983811 | |||||||||
| WBsf1009889 | |||||||||
| WBsf1009890 | |||||||||
| WBsf219511 | |||||||||
| WBsf219512 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr15060 | ||||||||
| Expr15225 | |||||||||
| Expr1025258 | |||||||||
| Expr1036633 | |||||||||
| Expr1143905 | |||||||||
| Expr2000500 | |||||||||
| Expr2018725 | |||||||||
| Drives_construct | WBCnstr00028797 | ||||||||
| WBCnstr00042130 | |||||||||
| Construct_product | WBCnstr00028797 | ||||||||
| WBCnstr00042130 | |||||||||
| Regulate_expr_cluster | WBPaper00059605:simr-1(cmp36)_downregulated | ||||||||
| WBPaper00059605:simr-1(cmp36)_upregulated | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Positive | Positive_clone | C06A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.567785 | |||||||
| Reference | WBPaper00058211 | ||||||||
| WBPaper00059605 | |||||||||
| WBPaper00061077 | |||||||||
| Method | Gene |
